Pseudomonas aeruginosa LES431, T223_05045
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa LES431
GCF_000508765.1|latest |
| Locus Tag |
T223_05045
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1066009 - 1067187 (+ strand) |
Cross-References
| RefSeq | YP_008941118.1 |
| GI | 568152170 |
| Entrez | 17985125 |
| NCBI Locus Tag | T223_05045 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
diguanylate phosphodiesterase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -10.07 |
| Kyte-Doolittle Hydrophobicity Value | 0.194 |
| Molecular Weight (kDa) | 42.8 |
| Isoelectric Point (pI) | 5.11 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 3SY8 | TRANSCRIPTION REGULATOR | 07/16/11 | Crystal structure of the response regulator RocR | Pseudomonas aeruginosa | 2.5 | X-RAY DIFFRACTION | 99.7 |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 405 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001731 (376 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: T223_05045
Search term: diguanylate phosphodiesterase
|
Human Homologs
References
No references are associated with this feature.