Pseudomonas putida H8234, L483_16550

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida H8234
GCF_000410575.1|latest
Locus Tag
L483_16550
Name
Replicon chromosome
Genomic location 3485509 - 3487884 (- strand)

Cross-References

RefSeq YP_008095089.1
GI 512581471
Entrez 16179585
INSDC AGN82512.1
NCBI Locus Tag L483_16550
UniParc UPI00034ED5B7
UniProtKB Acc R9VCD5
UniProtKB ID R9VCD5_PSEPU
UniRef100 UniRef100_R9VCD5
UniRef50 UniRef50_Q1LER4
UniRef90 UniRef90_R9VCD5

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB dependent/Ligand-Gated channel TonB
Synonyms
Evidence for Translation
Charge (pH 7) -10.14
Kyte-Doolittle Hydrophobicity Value -0.134
Molecular Weight (kDa) 84.5
Isoelectric Point (pI) 5.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 212 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003507 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: L483_16550

Human Homologs

References

No references are associated with this feature.