Pseudomonas aeruginosa PAO1, PA5340

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA5340
Name
Replicon chromosome
Genomic location 6008833 - 6009564 (+ strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_254027.1
GI 15600533
Affymetrix PA5340_at
DNASU PaCD00008309
Entrez 877609
GenBank AAG08725.1
INSDC AAG08725.1
NCBI Locus Tag PA5340
protein_id(GenBank) gb|AAG08725.1|AE004946_9|gnl|PseudoCAP|PA5340
TIGR NTL03PA05341
UniParc UPI00000C5FB0
UniProtKB Acc Q9HTL8
UniProtKB ID Q9HTL8_PSEAE
UniRef100 UniRef100_Q9HTL8
UniRef50 UniRef50_Q9HTL8
UniRef90 UniRef90_Q9HTL8

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7) -10.85
Kyte-Doolittle Hydrophobicity Value -0.432
Molecular Weight (kDa) 26.1
Isoelectric Point (pI) 4.42

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004909 (494 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA5340

Human Homologs

References

Genome-wide identification of Pseudomonas aeruginosa exported proteins using a consensus computational strategy combined with a laboratory-based PhoA fusion screen.
Lewenza S, Gardy JL, Brinkman FS, Hancock RE
Genome Res 2005 Feb;15(2):321-9
PubMed ID: 15687295