Pseudomonas aeruginosa BL06, Q060_04891

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa BL06
GCF_000481025.1|latest
Locus Tag
Q060_04891
Name
Replicon scaffold_7
Genomic location 554522 - 557569 (- strand)

Cross-References

RefSeq WP_023081659.1
GI 553748668
NCBI Locus Tag Q060_04891

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux transporter
Synonyms
Evidence for Translation
Charge (pH 7) -7.33
Kyte-Doolittle Hydrophobicity Value 0.182
Molecular Weight (kDa) 112.0
Isoelectric Point (pI) 5.93

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
TriC TriC is a resistance nodulation cell division (RND) transporter that is a part of TriABC-OpmH, a triclosan-specific efflux protein. [PMID:17720796] ARO:3003681 protein homolog model Strict 1937.9 99.9 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6VEJ TRANSPORT PROTEIN 01/02/20 TriABC transporter from Pseudomonas aeruginosa Pseudomonas aeruginosa 4.5 ELECTRON MICROSCOPY 99.9

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000156 (999 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Q060_04891

Human Homologs

References

No references are associated with this feature.