Pseudomonas aeruginosa PAO1, PA2078 (odsB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA2078
Name
odsB
Replicon chromosome
Genomic location 2285363 - 2287237 (- strand)
Transposon Mutants 2 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250768.1
GI 15597274
Affymetrix PA2078_at
Entrez 877905
GenBank AAG05466.1
INSDC AAG05466.1
NCBI Locus Tag PA2078
protein_id(GenBank) gb|AAG05466.1|AE004635_4|gnl|PseudoCAP|PA2078
TIGR NTL03PA02078
UniParc UPI00000C558D
UniProtKB Acc Q9I237
UniProtKB ID Q9I237_PSEAE
UniRef100 UniRef100_Q9I237
UniRef50 UniRef50_Q9I237
UniRef90 UniRef90_Q9I237

Product

Feature Type CDS
Coding Frame 1
Product Name
(7S,10S)-hydroperoxide diol synthase
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -12.79
Kyte-Doolittle Hydrophobicity Value -0.258
Molecular Weight (kDa) 67.3
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 54 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003376 (296 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA2078
Search term: odsB

Human Homologs

References

Unveiling the genes responsible for the unique Pseudomonas aeruginosa oleate-diol synthase activity.
Estupiñán M, Diaz P, Manresa A
Biochim Biophys Acta 2014 Oct;1842(10):1360-71
PubMed ID: 24980978
Pseudomonas aeruginosa Secretes the Oxylipin Autoinducer Synthases OdsA and OdsB via the Xcp Type 2 Secretion System.
Martínez E, Orihuela CJ, Campos-Gomez J
J Bacteriol 2022 Jul 19;204(7):e0011422
PubMed ID: 35658521