Pseudomonas aeruginosa PAO1, PA1884

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA1884
Name
Replicon chromosome
Genomic location 2053672 - 2054223 (- strand)
CommentPA1884 negatively regulates the expression of PA1885[PMID:33436508]

Cross-References

RefSeq NP_250575.1
GI 15597081
Affymetrix PA1884_at
DNASU PaCD00006848
Entrez 879933
GenBank AAG05273.1
INSDC AAG05273.1
NCBI Locus Tag PA1884
protein_id(GenBank) gb|AAG05273.1|AE004614_7|gnl|PseudoCAP|PA1884
TIGR NTL03PA01885
UniParc UPI00000C54ED
UniProtKB Acc Q9I2L3
UniProtKB ID Q9I2L3_PSEAE
UniRef100 UniRef100_A0A072ZHJ3
UniRef50 UniRef50_B7VAY9
UniRef90 UniRef90_B7VAY9

Product

Feature Type CDS
Coding Frame 1
Product Name
transcriptional regulator
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) 2.36
Kyte-Doolittle Hydrophobicity Value -0.370
Molecular Weight (kDa) 20.5
Isoelectric Point (pI) 8.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 259 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003525 (312 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1884

Human Homologs

References

Transcription Inhibitors with XRE DNA-Binding and Cupin Signal-Sensing Domains Drive Metabolic Diversification in Pseudomonas.
Trouillon J, Ragno M, Simon V, Attrée I, Elsen S
mSystems 2021 Jan 12;6(1)
PubMed ID: 33436508