Pseudomonas aeruginosa PAO1, PA1828

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Stover et al., 2000)
GCF_000006765.1|latest
Locus Tag
PA1828
Name
Replicon chromosome
Genomic location 1986989 - 1987756 (- strand)
Transposon Mutants 3 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250519.1
GI 15597025
Affymetrix PA1828_at
Entrez 881724
GenBank AAG05217.1
INSDC AAG05217.1
NCBI Locus Tag PA1828
protein_id(GenBank) gb|AAG05217.1|AE004609_4|gnl|PseudoCAP|PA1828
TIGR NTL03PA01829
UniParc UPI00000C54B8
UniProtKB Acc Q9I2R7
UniProtKB ID Q9I2R7_PSEAE
UniRef100 UniRef100_W0YR04
UniRef50 UniRef50_C0QJZ0
UniRef90 UniRef90_F6AC53

Product

Feature Type CDS
Coding Frame 1
Product Name
probable short-chain dehydrogenase
Product Name Confidence: Class 3
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 0.80
Kyte-Doolittle Hydrophobicity Value 0.188
Molecular Weight (kDa) 26.9
Isoelectric Point (pI) 7.41

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 2
Cytoplasmic Class 1
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003571 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1828

Human Homologs

Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 1.2e-38
Percent Identity: 37.3
Ensembl 110, assembly GRCh38.p14
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 1.2e-38
Percent Identity: 37.3

References

No references are associated with this feature.