Pseudomonas aeruginosa PAO1, PA1088

Gene Feature Overview

Strain	Pseudomonas aeruginosa PAO1 (Stover et al., 2000) GCF_000006765.1|latest
Locus Tag	PA1088
Name
Replicon	chromosome
Genomic location	1175614 - 1176375 (+ strand)
Transposon Mutants	2 transposon mutants in PAO1
Transposon Mutants in orthologs	5 transposon mutants in orthologs

Cross-References

RefSeq	NP_249779.1
GI	15596285
Affymetrix	PA1088_at
Entrez	878583
GenBank	AAG04477.1
INSDC	AAG04477.1
NCBI Locus Tag	PA1088
protein_id(GenBank)	gb|AAG04477.1|AE004539_19|gnl|PseudoCAP|PA1088
TIGR	NTL03PA01089
UniParc	UPI00000C5242
UniProtKB Acc	Q9I4P1
UniProtKB ID	Q9I4P1_PSEAE
UniRef100	UniRef100_W0YNN0
UniRef50	UniRef50_A4XW78
UniRef90	UniRef90_W0YNN0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein Product Name Confidence: Class 4
Synonyms
Evidence for Translation
Charge (pH 7)	-6.90
Kyte-Doolittle Hydrophobicity Value	-0.318
Molecular Weight (kDa)	28.8
Isoelectric Point (pI)	4.80

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 61 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001050 (992 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PA1088

Human Homologs

References