Pseudomonas sp. LAIL14HWK12:I6, D907_RS0111405

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. LAIL14HWK12:I6
GCF_000514295.1|latest
Locus Tag
D907_RS0111405
Name
Replicon scaffold00005.5_C
Genomic location 190416 - 191618 (- strand)

Cross-References

RefSeq WP_025753927.1
GI 647315912
NCBI Locus Tag D907_RS0111405

Product

Feature Type CDS
Coding Frame 1
Product Name
beta-ketoadipyl CoA thiolase
Synonyms
Evidence for Translation
Charge (pH 7) -3.90
Kyte-Doolittle Hydrophobicity Value 0.033
Molecular Weight (kDa) 41.9
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6PCD TRANSFERASE 06/17/19 Crystal structure of beta-ketoadipyl-CoA thiolase mutant (C90S-H356A) in complex Octanoyl coenzyme A Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) 1.37 X-RAY DIFFRACTION 96.0
6PCC TRANSFERASE 06/17/19 Crystal structure of beta-ketoadipyl-CoA thiolase mutant (H356A) in complex hexanoyl coenzyme A Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) 1.96 X-RAY DIFFRACTION 96.2
6PCB TRANSFERASE 06/17/19 Crystal structure of beta-ketoadipyl-CoA thiolase mutant (H356A) in complex with COA Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) 1.61 X-RAY DIFFRACTION 96.2
6PCA TRANSFERASE 06/17/19 Crystal structure of beta-ketoadipyl-CoA thiolase Pseudomonas putida (strain ATCC 47054 / DSM 6125 / NCIMB 11950 / KT2440) 1.81 X-RAY DIFFRACTION 96.5

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000227 (529 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: D907_RS0111405

Human Homologs

Ensembl 110, assembly GRCh38.p14
acetyl-CoA acyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:83]
E-value: 3.5e-80
Percent Identity: 43.2

References

No references are associated with this feature.