Pseudomonas sp. LAIL14HWK12:I12, D902_RS0110110
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. LAIL14HWK12:I12
GCF_000514335.1|latest |
| Locus Tag |
D902_RS0110110
|
| Name |
|
| Replicon | scaffold00005.5_C |
| Genomic location | 220916 - 221275 (+ strand) |
Cross-References
| RefSeq | WP_016711134.1 |
| GI | 515081433 |
| NCBI Locus Tag | D902_RS0110110 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
transcriptional regulator
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 9.47 |
| Kyte-Doolittle Hydrophobicity Value | -0.742 |
| Molecular Weight (kDa) | 13.6 |
| Isoelectric Point (pI) | 10.66 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 8H8H | TRANSCRIPTION | 10/22/22 | Crystal structure of the N-terminal domain of H-NS family protein TurB (TurB_nt50) | Pseudomonas putida KT2440 | 2.7 | X-RAY DIFFRACTION | 98.0 |
| 5B52 | TRANSCRIPTION | 04/21/16 | Crystal structure of the N-terminal domain of H-NS family protein TurB | Pseudomonas putida (strain KT2440) | 2.3 | X-RAY DIFFRACTION | 96.7 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG002890 (507 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: D902_RS0110110
Search term: transcriptional regulator
|
Human Homologs
References
No references are associated with this feature.