Pseudomonas sp. LAMO17WK12:I2, D883_RS0128890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. LAMO17WK12:I2
GCF_000514375.1|latest
Locus Tag
D883_RS0128890
Name
Replicon scaffold00004.4
Genomic location 39299 - 40609 (+ strand)

Cross-References

RefSeq WP_027608152.1
GI 653595274
NCBI Locus Tag D883_RS0128890

Product

Feature Type CDS
Coding Frame 1
Product Name
16S rRNA methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 2.42
Kyte-Doolittle Hydrophobicity Value -0.065
Molecular Weight (kDa) 47.3
Isoelectric Point (pI) 7.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: D883_RS0128890

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.0e-30
Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.0e-30
Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.0e-30
Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.0e-30
Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.0e-30
Percent Identity: 33.2
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 8.0e-30
Percent Identity: 33.2

References

No references are associated with this feature.