Pseudomonas sp. LAMO17WK12:I2, D883_RS0105005
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. LAMO17WK12:I2
GCF_000514375.1|latest |
| Locus Tag |
D883_RS0105005
|
| Name |
|
| Replicon | scaffold00002.2_C |
| Genomic location | 451305 - 452573 (- strand) |
Cross-References
| RefSeq | WP_027603992.1 |
| GI | 653591084 |
| NCBI Locus Tag | D883_RS0105005 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter ATP-binding protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -6.56 |
| Kyte-Doolittle Hydrophobicity Value | 0.033 |
| Molecular Weight (kDa) | 46.3 |
| Isoelectric Point (pI) | 5.97 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001312 (602 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: D883_RS0105005
Search term: ABC transporter ATP-binding protein
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value:
5.1e-13
Percent Identity:
25.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value:
5.1e-13
Percent Identity:
25.2
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
E-value:
5.1e-13
Percent Identity:
25.2
|
References
No references are associated with this feature.