Pseudomonas fluorescens SS101, PflSS101_2479

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens SS101 chromosome, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGCTGGACGGCGTGCACCCGGCCATCGACGACCCCGAAGGCCTGCACCGCTCGATCCGGCACGCTTATGAGATGGGCTTTGCCGGGGCATTGTGCAT TCATCCCAAGCAAGTCGCGGTGATCCATGCCGCGCTGGCGCCGAGCGCCGAAGAGCTGGCCTGGGCCAGGCGCGTGGTGGAGGCGGGTGCCCATGGGGCA GGGGCTTATCAGATTGACGGGCAGATGGTGGATGCGCCGGTACTGCTGCGCGCGCAGCGGCTGCTGGCCGCGCAACTGTAACTGACAAAACCGGGAGCAA AATGTGGGAGCTGGCTTGCCTGCGATAGCGGTAGAACAGTCAATGTTTGTGTTGCCTGACACACCGCTATCGCAGGCAAGCCAGCTCTCACACTGGACGC GTTCGGCCAGGCCGAACGCAGGTATCTAAAATTCGAAATTCACGACACGCGTTACATCAGGCACCTTGCCTTACAACACAACAATAAGAAGGTGATTCCC
DNA Sequence for Gene
>PflSS101_2479
ATGCTCAAGCTTTCCCGGGCGCTGCTGTGCGCCGCCACCTTGTTTACCGCAGGCCTGGCCCAGGCGGCAGACCCGATTGTGATCAAGTTCGCCCACGTGG TGGCCGAAAACACTCCTAAAGGCCAGGGCGCGCTGCTGTTCAAAAAACTGGCTGAAGAGCGCCTGCCCGGCAAGGTCAAGGTTGAGGTGTACCCGAACTC GTCGCTGTTTGGCGATGGCAAGGAAATGGAAGCGTTATTGCTGGGCGACGTGCAAATGCTCGCGCCGTCCCTGGCCAAGTTCGAGCACTACACCAAACAA GTGCAGATCTACGACCTACCGTTCCTGTTCAACGACCTGGCCGCCGTCGACCGTTTCCAGGCCGCTGAGGGCAAGCAACTGCTGACCTCGATGCAGGATA AGAACATCCTTGGCCTGGCCTATTGGCACAACGGCCTCAAGCAACTCTCTGCCAACAAGGCCCTGCATGAACCCAAGGACGCCCGTGGCCTGAAGTTCCG CGTGCAGGCTTCCAGTGTGCTCGAAGAACAGTTCAAGGCGATCCGCGCCAACCCGCGCAAGATGAGCTTTGCCGAGGTCTACCAGGGCCTGCAGACCGGC ACCGTGAATGGCACCGAGAACACCTGGTCCAACTATGAAAGCCAGAAGGTCAACGAAGTGCAGAAGTACTTCACCGAGTCCAACCATGGTCTGATCGACT ACATGGTGATCACCAACGCGAAATTCTGGAACGGCCTGGCGCCGGATGTGCGCAGCACCCTGGAGCAGATCATGGCCGAGGTCACCGTGGAGGTGAACAA GCAGGCTGAAGCACTGAACCAGTCGGCCAAGCAGAAGATCATCGACGCCAAGACCAGCGAAATCATCGAGCTGACCCCCGCGCAACGTGCGCTTTGGCGC GAAGCCATGCGCCCGGTGTGGCAGAAGTTCGAGGGCGAGATTGGGGCTGACCTGATCAAGGCGGCGGACCAGTCCAACCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCCTGTGGGAGCGGGCTTGCCCGCGACTGATCGTTCCCACGCTCCGCGTGGTAATGCATCCCGTGACGCTCCGCGTCGCCTTACGCACGGCGTGATAC AGGACGTGGAACGTCCGGGGCGGCATTACCACGCGGAGCGTGGGAACGATCTAGCAGGTTGACCTGGCTTTTACCTATCTCTGCCTCGCGAGGTTTTGCC ATGCAAACGCTAAGGCGCGTCTGGGAGCACCTGGAGGAAGGCTTCATTGCTTTCCTGCTGGCCGCCATGACCCTGGTGACATTCGTCTACGTCATGCTCA ACAACGTCTACACCCTGTTCTTTGCCCTGGCCGACAAATGGGCCTGGAGCGGCCCCTTCTTCAATGCCCTGGGCGACGGCACCATGACCTTGGCCCAAGA GATGACCTGGAGCGTGGCGCTGACCAAGGCCATGTTCGGCTGGTTGATTTTCTTCGGCATTTCTTACGGCGTGCGCACCGCTGGCCACCTGGGCGTGGAC
Amino Acid Sequence
>C4-dicarboxylate ABC transporter
MLKLSRALLCAATLFTAGLAQAADPIVIKFAHVVAENTPKGQGALLFKKLAEERLPGKVKVEVYPNSSLFGDGKEMEALLLGDVQMLAPSLAKFEHYTKQ VQIYDLPFLFNDLAAVDRFQAAEGKQLLTSMQDKNILGLAYWHNGLKQLSANKALHEPKDARGLKFRVQASSVLEEQFKAIRANPRKMSFAEVYQGLQTG TVNGTENTWSNYESQKVNEVQKYFTESNHGLIDYMVITNAKFWNGLAPDVRSTLEQIMAEVTVEVNKQAEALNQSAKQKIIDAKTSEIIELTPAQRALWR EAMRPVWQKFEGEIGADLIKAADQSNQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site