Strain | Pseudomonas thermotolerans DSM 14292 H165DRAFT_scaffold00007.7, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGCACCGGCGAGGAGACCAACCTGCTGGCCCAGGCGGCTCTCGGCCTGGGCCTGGCCGGTGGTTCCTCGGTGGCCGGCAGCCTGGCGCAGAGCCTCGGCA TCAGTGACTTCCAGCTGGACACCAGCGGCACCGGACAGCAGACCAGCGTGGTGGCCAGTGGGCGGATCACCGATCGGCTCAGCCTGCGCTACGGGGTGGG GGTATTCGAGCCGGCCAACACCATCGCCCTGCGCTATGAGCTGACCCGCCAGCTGTACCTGGAGGCGGCCAGCGGCCTGGCCAGTTCCCTGGACATCTTC TACCGCCGGGATTTCTGAACCGGCGGGGAACCTTGGCGGCCTTCCGGCTTCTCAGTGGGCGGGGAGAGCGGGGCAGCCGTCGTTCGGCAAATCAAACCGC ATACCTGCCACAGGTTGCTCAGGACATTTGCTCCCGGGCATGTTTAACTTTTCGAGCAAGACCGACTCATTCACTCAGGTAAACAAGAAGGACCCGTCTC
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DNA Sequence for Gene |
>H165_RS0106965
|tpx
ATGACTCAAGTGACCCTCAAGGGCAACCCGGTCGAAGTTGCCGGTCAGCTGCCGCAGCCTGGCCAGCAGGCGCCGGCGTTCAGCCTGGTCGGCAAGGACC TGGCCGACGTGACCCTGGCCAGCCTGGCCGGCAAGCGCAAGGTGTTGAACATCTTCCCGAGCATCGATACCCCAACCTGCGCCACCTCGGTGCGCAAATT CAACGAGAAGGCCAGCCAGTTGGCCAACACCCTGGTGCTGTGCATCTCCGCCGACCTGCCGTTCGCCCAGTCGCGCTTCTGCGGCGCCGAGGGTCTGACC AACGTGATGACCCTGTCGACCCTGCGCGGCAGCGAATTCCTCAGGAACTACGGCGTGGCCATCACCAGCGGACCGCTGGCCGGCCTGGCCGCCCGTGCCG TGGTGGTGCTGGACGAGCACGATCGAGTGCTGCACAGCGAACTGGTCGGCGAGATCGCCAACGAGCCGAACTACGATGCCGCCCTGGCGGCCCTGCAGAA GTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TTCCTCCCTGCGAGAACGGCCTGCCCGTCAGGCCGTTTTCCCGTGCCGGCGGAACGCGAAGGGCAGGGGCCCGCCCCTGACATGGCCGGAAATGCCTTGT ACCGCCGTCCCGGATCACCATCCCTGCAGCTTTTCATTGCCCGTCAGTGGGTTAGCAACGTCAGCTTTAGGTAAAAAGCCGGTAAAGAGACTTTGCTTGA CGACCCGCTGTGCTTATCGTGCAGCCTTCCGAAAATTCTGACTGTCCATCATGGCCGACTTCCCTACCAACAACTCCGCTTCCCGAATCCGTCGCTACTG GCCGTTGTTCCTTCTGGTCGCCGTCGTCGTGGCCCTGCTGGCCTGGTGGCTGTGGCCATCCGCCAACCCCGACCAGCAGGCGAGCGGGCAGAGGTTCAAG CCCCAGCAGGGCAGTTCGCTGACCCAGCCCCAGGGCCCGCGCCGGCGTGGCGGCCCGCCCGGCTTCGGCGGCTTCGATTCCGGTCCGACCCCGGTCCGGG
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Amino Acid Sequence |
>lipid hydroperoxide peroxidase
MTQVTLKGNPVEVAGQLPQPGQQAPAFSLVGKDLADVTLASLAGKRKVLNIFPSIDTPTCATSVRKFNEKASQLANTLVLCISADLPFAQSRFCGAEGLT NVMTLSTLRGSEFLRNYGVAITSGPLAGLAARAVVVLDEHDRVLHSELVGEIANEPNYDAALAALQK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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