Pseudomonas sp. CFT9, CFT9_06315

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. CFT9 soap_scaffs_T9.Contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CCCAGCGGCGGGGTGTCAACCGTTAATGAGCTGATCGCTGAAATAAGCGCTAATTATTCTGAAATCAAGGTGTTGGCTGCATTGTGCAGGCAAAAACAAG CGCGCACAAAAAAGGCCACTCTTTCGAGTAGCCTTTTTTGATGTTTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGC TACCAGACTGCTCCATCCCGCGTCTGTGTGTCGGCATTCTACAGAGGAACGCGAGTGTGTCAACCTGTGAATCAAACAAAAGCGCTTGTGGTTCAATCGG TTAGCTCTCCAAAGAGGGGGCGTGAAGTGCTCTGGGCCAGTCAGGCCAAGGCTTTCAGCTCTATCGGAAGCCCGAATTCGATTGAAAAAATAAATTCATC AAGGAAACTTCCTACCACTTGGAAGGAAGAATCAAACTACTGGTGCTATATACAGGTGTGAATGCGATACTGGCCACCCGTTGGTTCACACCCCGTTTAT
DNA Sequence for Gene
>CFT9_06315
ATGACGCAGCGCAAAATCATCCACGTTGACTGTGATTGCTTCTACGCCGCCATCGAGATGCGTGACGACCCGAGCCTGGCGCAAAAGCCCTTGGCGGTGG GCGGTTCGGCGGACCGGCGGGGGGTGATCGCTACCTGCAACTACGAGGCGCGAGCGTATGGGGTGCGTTCGGCGATGTCGTCACGTCATGCCTTGAAGCT CTGCCCGGACTTGACCATTGTTAAGCCGCGCATGGATGCCTATAAAGAAGCGTCGAAAGAAATCCAACTGATCTTCCGCGACTACACCGACTTGATCGAG CCGTTGTCGCTGGATGAGGCTTACCTTGATGTGTCTGACAGCCCGCATTTTGGCGGCAGCGCCACGCGTATTGCCCAGGACATTCGGCGCCGGGTCTCCA ACCAGTTGCATATCACTGTGTCTGCCGGCGTGGCGCCCAACAAGTTTTTGGCCAAGATCGCCAGCGACTGGAAAAAGCCCAACGGCCTGTTTGTGATCAC GCCGGATCAGGTTGAAGACTTTGTCTCGCAGTTGCGTGTCAGCAAGCTGCATGGCGTGGGCAAGGTCACCGCTGACAAGCTGGCGCGCCTGGGCATCGAA GACTGCCTGCAATTGCGCGACTGGAACAAACTGGCGCTGGTGCGCGAATTCGGCAGTTTTGGCGAGCGCCTCTGGAGCCTGGCCCGTGGAATTGATGACC GTGTGGTGCAAAACGACAGCCGTCGGCAATCGATTAGCGTGGAAAACACCTACGATGTGGACTTGCCGGATCTTTCAAGCTGCCTGGCGAAACTGCCGGA GCTGATGGAGACCCTGGCCGGGCGCATGGCGCGTATCGACAGTAGCTACCGGGCGGGCAAGCCGTTCGTGAAAGTGAAGTTTCATGACTTTACCCAGACG ACGCTGGAGCAGGCCGGGGCAGGACGGGATCTGGAGAGTTATGAACAGTTGATGACCCAGGCGTTCAATCGCGGGGGCAAGCCGGTGCGGTTGCTGGGGA TAGGCGTACGGTTGCTGGACCTGAGCGGCGGCAACGAACAGCTCGAGTTTTCCTGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AAACCCGAAACAAATGTGGGAGCTGGCTTGCTTGCGATAGCCGTGTGTCAGTCAAGAATGCTTTAACTGATACACCGCTATCGCAGGCAAGCCAGCTCCC ACAGTTTGATCTTCACAGGTATTGCACGATCAGCGTGCGCCAGGATCGGCGACTAACCGCCCCCCATCCTTGGTCAACGCCTGCACAAACTCCTGCTGCA ACTCCGGATCATTGCGCGTCAGTTCAATCAGGCTTTGTTCCAGCTCGCTGGCTTCTTCTTCCAGGCCCAGCTCCGACAAGCGTTTGACCCGGTGTACCCA CTGGTTCACTTCGTCATCTTCCAGGTCGTCATAGATCAGGGCATGGGCTTCGAGCAGCTTGCTGCGCAGTGTGTTGCTGACCGCCAGGGTCGAGTCGGTA TGCACGTCGTCCTGGCCATCCGCCACAGTGATTTTCAGCGTGGTGACGCGGTTCAGGTCCTGCTCGGCAAAGGGGCTGTCCAACAGGTTAAGGCGCAGTA
Amino Acid Sequence
>DNA polymerase IV
MTQRKIIHVDCDCFYAAIEMRDDPSLAQKPLAVGGSADRRGVIATCNYEARAYGVRSAMSSRHALKLCPDLTIVKPRMDAYKEASKEIQLIFRDYTDLIE PLSLDEAYLDVSDSPHFGGSATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSQLRVSKLHGVGKVTADKLARLGIE DCLQLRDWNKLALVREFGSFGERLWSLARGIDDRVVQNDSRRQSISVENTYDVDLPDLSSCLAKLPELMETLAGRMARIDSSYRAGKPFVKVKFHDFTQT TLEQAGAGRDLESYEQLMTQAFNRGGKPVRLLGIGVRLLDLSGGNEQLEFSW
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site