Pseudomonas sp. P818, P818_RS0123320
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. P818 P818-scaffold26, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCAACAATCAGACCAGATCAAACAGCGTAACGCCAGCGTCACTGAAACCCGCCCTGTGTCTACGACTCAGGGCTGCCTACGTGAACTTCAAATACCAGTG CCAGCCGGCGAAGAAGCGGGATGGGACAACTGCGCGAAGAGCGAAGTCGGTCAAAAACCAGGCAATTTCAGGCCTTGCTTGGGTGCTAATGCCTAAACCG ATTTGTTAGAGTCGCCGCCTCTAAATGTCCACCTCCCCACAGCTCGTTCCGCAATAAGCGGCAAAGAAAGTCGCATGGAAGCGTTCAGGTTGTGCCTAAC ATCAAGGATGATTTATGACTCCGTTACCGTTCCGTAAGACTCTTCTCACTCTGGTCATCATTAATCTTGCCTATCCCGTCTCTGGCGTTGCGCAAACACT GAACAACAGCGGTACGCGGGGCGCGCTAAATATTAATGGTGGGCCGGTAGAGCAAATCATCAATAGCGGCACCATCCAGGCCGACGGTACCGCTATTACG
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| DNA Sequence for Gene |
>P818_RS0123320
ATCGAAGGCTTTACAACCAATCAGCCCTGGATACTGAACACCGGTAATATCATCGGAGGTGTAAACGCCATTGATGCCAGCGGTGCCCTTAACCGTCCCG GAGGTACGGGCGTAGAAATGAAATGGAATGCCGGCACAATCAAGGGCAATCTGGTTGGCATGCATGAAGTCGCGATTGAAGGCCCAGTCATCTTTGATGG TCAGTCATTGGAGGCGCGATTTGTTGATATTGGCTGGACGGCAGACAACGCCACTGGCCACCTGGAGCTCAAGCAGGCTCATACCACTATCAGTACCGAC ATTTTGCAAGTCGCCCAAGGCGCATCGCTGGGGCTGACATTGAGCAGCGCGACCGATGTCCAACGTGCGCTTGTCACGGTCTCTGGGGACGCTGTTTTCG AGGCAAACTCGCAAATCAAGTTGGCTGCCAGGGGTAGTGACTTCAGCGTGGAAGGCACTACCTACACCTTGTTAGAAGCTGGCCGACTGGTCGATCAAGG CTTGAGCGTCGTTAGCAGCTCAGCGCTGCTGAACGTGGATAGCTATGCGGTCAATGGCAACACCATCATTTCAACTGTCACAGGCAAAGGCACCGACGAA GTAGCGAGCGATATTGCCAGCAACGGTGCATCCGGCAACGCTCAGACCGCCATCAAACGCTTCTCTCCTCTGCTGGGCAGCCTGGGAACCAACAATCCAG ACGATCCCGTGTTTCTGGCCTTTGCTAACGCAGACGAGGCCCAGTTAGCGCAGTTATCCGAGCAGCTAGCCCCCGACGTCAGTGGTGGTAGCGTTAGAGC CGCAGTCGCTGGCCAGAACCTGATCAGTAACGCCGTTGCAAATCGCACAAGTGGTATTCGCGGCCAATCTTCCGGTGAATCATTCAAAGCCACCGGGTTT TGGGTTCAGGGTCTGTACAGCGATGCACAACAGCAGCGCCGTAATGGTATTGCCGGATATAACGCTTACAGCCATGGTGTAGCAATTGGTACCGATGGCA AAGTAACGGACCAGCTGACGCTCGGTTTGGCATACAGCTTCCTCAATACCGCAGTAAACGGTACCACTGGCAATAAAACCGATGTAGAGAGCCACGCCTT TACGCTGTACAGCGGCTTTGAGAGTGGTGCCTACTTTCTTGACGGCAACCTGACTTACGGTATCAATGACAATAGCGGCAAACGTCAGATCGCCTCGAGC ACAGCACAAAGTGACTATGACAGCACGGTGCTTGGCCTGAATCTGGTTGGTGGCTATACCTACCGTATCAACAGCAATTTACTGGTGGAACCGCGCCTGG CCTCTCGTTATAACCAGGTGAGAATTGATGGTTATAAAGAAAAAGGCTCTGCGGCTGCTCTGAAAGTAGAGGACCAGCGCTATGAAAGCTTCGATCTGGG CGCAGGGGTTCGTATAGCGGGTAGCTATTCACTGGCTCAAGGACGCATCGAACCACAAGCCAAACTAATGGCCTATCACGACTTTGCGGCCGACCAAACG TCCAGCACCTCAACCTTTGTACTGGGTGGCACACCCTTCGTCACGACTGGTGCCAAACCTGCTCGTAACAGCTACGAGATGGGTGTTGGGGTGGACTACC TTTTGGGAGCTGTGACACTTGGCGCAAGCTATGACTATGTAGGCAAATCTAGCTTTAGTGCCGATACGTTTACCGCCAGAGTGCGTTACGACTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAGGTCAGCGGCCCGCCACGTATTCAGCATACTTCTCATCGGTATGCTGCTGGCGGGCTGCCAGACTCCACTCGACCAGTTGCAAGAGCTGGCCACTGC TCACCAGCGACAGATCCAAACTCTACCGGGCTTACCATTCCCTCTGGTTATCGCTGCCCCTCGACAGATACCAGCAGGCCACCGACTACGCGTATATGTC GAAGGGGATGGCCGTGCGTGGGTTCGCCCCAACCGACCGAGCTCCGACCCAAGCCCACGCCAGCTGCTGGTGGCCGAGCTGGCCTTTGCCGACCCGACAC CAGCGGTTTATCTGGCACGCCCCTGCCAGTTCATCAGTGGCCCGGCATGCACAACCGAGCTATGGACTAACCGACGCTATGCCGAGGAAGTGGTGCACAG CCTCGATCACGCGCTCGACCATCTGAAGGCGCACCACAAAAACCACGACTTTGAACTGATCGGCTATTCCGGCGGAGCTACCTTGGTGTTGCTGTTAGCT
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| Amino Acid Sequence |
>hypothetical protein
MEGFTTNQPWILNTGNIIGGVNAIDASGALNRPGGTGVEMKWNAGTIKGNLVGMHEVAIEGPVIFDGQSLEARFVDIGWTADNATGHLELKQAHTTISTD ILQVAQGASLGLTLSSATDVQRALVTVSGDAVFEANSQIKLAARGSDFSVEGTTYTLLEAGRLVDQGLSVVSSSALLNVDSYAVNGNTIISTVTGKGTDE VASDIASNGASGNAQTAIKRFSPLLGSLGTNNPDDPVFLAFANADEAQLAQLSEQLAPDVSGGSVRAAVAGQNLISNAVANRTSGIRGQSSGESFKATGF WVQGLYSDAQQQRRNGIAGYNAYSHGVAIGTDGKVTDQLTLGLAYSFLNTAVNGTTGNKTDVESHAFTLYSGFESGAYFLDGNLTYGINDNSGKRQIASS TAQSDYDSTVLGLNLVGGYTYRINSNLLVEPRLASRYNQVRIDGYKEKGSAAALKVEDQRYESFDLGAGVRIAGSYSLAQGRIEPQAKLMAYHDFAADQT SSTSTFVLGGTPFVTTGAKPARNSYEMGVGVDYLLGAVTLGASYDYVGKSSFSADTFTARVRYDF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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