Pseudomonas veronii 1YdBTEX2, H736_RS0119725
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig27, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCTTGAGCACGTATTCCAGCTCAGTGCTGCGATAGGCCGGATTGATATTGACCAGGATCACCCCGAGCTTGGCGCTGGCCAACTGGCTGATGCACCACTC GGCGCAGTTCGGCGCCCAGATGCCCAGGCGGTCGCCGCGCTGCAGGCCCAAAGCCAGCAGCGCGCGGGCGTGCAGGTCGACGGTCTCCGCCAGTTGCCGC CAGGTGTAGCGGCGTTGCTGGTGACGCACCACCAAGGCTTCCCCATCGGGAGACTGCGCAACCGTGTGATCGAAGGCCTGACCGATCGTCATGGCCAACA AGGTCTTGTCCTGAGAGCCACGGCTGTAGCTCTGATTCGGTTGATCCATAACGACCCCTGTTGTCTTTTTTGTAGGTTGACGTAAACGTAAACTACGATT GACAGCGCCGCAACGCAAGCTTACGTTAACGTAAAGGTGAGCATCCCCTCCCCCGGTGCCGTCACCCCACAACAACAAAGCTCAATAAAGGTGCCTGTCC
|
|
| DNA Sequence for Gene |
>H736_RS0119725
ATGAGTTACCCCTCCCTGAACTTCGCCCTCGGCGAAACCATCGACATGCTGCGCGACCAAGTGCAGTCCTTCGTGGCCAAGGAGATTTCTCCGCGCGCGG CACAAATCGACATCGACAACCTGTTCCCCGCCGACCTGTGGCGCAAGTTCGGTGACATGGGCCTGCTGGGCATTACCGTGGCCGAAGAATACGGCGGTGC CGGCCTGGGCTACCTGGCCCATGTGGTGGCTATGGAAGAGATCAGCCGTGGTTCGGCGTCGGTGGCGTTGTCCTACGGCGCCCACTCCAACCTCTGCGTG AACCAGATCAACCGCAACGGCAACCATGAACAGAAACTCAAGTACCTGCCGAAGCTGATCAGCGGCGAACACGTCGGCGCCCTGGCCATGAGCGAGCCGA ATGCCGGCTCCGACGTGGTCTCGATGAAACTGCACGCCGACAAGCGCGGCGACCACTACGTGCTCAACGGCAGCAAGACCTGGATCACCAACGGCCCCGA CGCCAGCACCTACGTGATCTACGCCAAGACCGACCTGGAGAAAGGCGCCCACGGCATCACGGCGTTCATCGTCGAGCGCGACTGGAAAGGCTTCAGCCGC AGCAACAAGTTCGACAAGCTCGGCATGCGCGGCTCCAACACCTGCGAGCTGTTCTTCGATGACGTGGAAGTGCCGGAGGACAACATCCTCGGCGTGCTCA ACGGCGGCGTCAAAGTGCTGATGAGCGGCCTGGACTACGAACGCGTCGTACTGTCCGGCGGCCCGACCGGGATCATGCAAGCCTGCATGGACCTGATCGT GCCGTACATCCACGACCGCAAGCAGTTCGGCCAGAGCATCGGCGAATTCCAGCTGATCCAGGGCAAGGTCGCCGACATGTACACCCAACTCAACGCCAGC CGCGCCTACCTGTACGCGGTGGCCCAGGCCTGCGAGCGCGGCGAAACCACGCGCAAGGACGCGGCCGGGGTGATCCTCTACAGCGCCGAACGCGCCACGC AAATGGCCCTCGACGCGATCCAGATCCTGGGCGGCAATGGCTACATCAATGAATTCCCCGCCGGACGCCTGCTGCGCGACGCCAAGCTGTACGAAATCGG CGCCGGCACCAGTGAGATCCGGCGCATGTTGATCGGTCGCGAACTCTTCAACGAAACCCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AGGAGCGCGCCATGGCCACCTTGCACACCCAGCTCAACCCGCGCTCGGCGGAGTTCGCCGCCAACAGCGCGGCGATGCGCCAACAGGTCGACGCCCTGCA CACCCTGCTCGCCCAGGTGCAGCAAGGCGGCGGCGCCAAGGCCCAGGAGCGCCACACCTCGCGCGGCAAACTGCTGCCACGCGAGCGGATCAACCGCTTG CTCGACCCGGGCTCGCCGTTCCTGGAACTCAGCCAACTGGCCGCCCATCAGGTGTATGGCGAAGACGTGCCGGCCGCCGGGGTGATTGTCGGGATCGGCT GCGTGGAAGGCGTCGAATGCATGATCGTCGCCAACGACGCCACGGTGAAAGGCGGCTCCTACTACCCGCTGACAGTCAAGAAACACCTGCGCGCGCAGAC CATCGCCGAACAGAACCGCCTGCCATGCATCTACCTGGTGGATTCCGGCGGCGCCAACCTGCCGCGCCAGGATGAGGTCTTCCCCGACCGCGAGCACTTC
|
|
| Amino Acid Sequence |
>isovaleryl-CoA dehydrogenase
MSYPSLNFALGETIDMLRDQVQSFVAKEISPRAAQIDIDNLFPADLWRKFGDMGLLGITVAEEYGGAGLGYLAHVVAMEEISRGSASVALSYGAHSNLCV NQINRNGNHEQKLKYLPKLISGEHVGALAMSEPNAGSDVVSMKLHADKRGDHYVLNGSKTWITNGPDASTYVIYAKTDLEKGAHGITAFIVERDWKGFSR SNKFDKLGMRGSNTCELFFDDVEVPEDNILGVLNGGVKVLMSGLDYERVVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNAS RAYLYAVAQACERGETTRKDAAGVILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|