Pseudomonas veronii 1YdBTEX2, H736_RS0109195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig15, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCACATAACGTTGATTTTTATCAAGCAATCGAGCTGAAACCGGGCGCGGCCAGCGCCCTCAGTCGCAGTCATTAAAATCAGCACAAACGAAAACACCGCC GCGACGGTGAGGTCGTGGCGGTGTTTGACGTGTACTTAAAACTGGTTGCGGGAGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTAC CAGACTGCTCCATCCCGCGTCTGTGTGTCGGCATTCTACAGCGCAACGCAGGGGTGTCAACCTATGAATCGAAGAAAAGCGCTTGTGCTTCAATCGGTTA GCTCTCCATCAGAGCCAGGTTGAGCCTTCGGGGCCAGTCTGGCCGAGGGTTTCAGCTCTATTGGCAGCTTAAATTCGATTGAGAAAATAAATTCATCTGA GAATTTTCCTACCGCTCAAGCGGAAGATTCAAACTACTGGTGCTATATACAGGGGTGAGTGCGATACTGCCCATCCGTTGGATTGCTCCCCTTCTTATAT
|
|
| DNA Sequence for Gene |
>H736_RS0109195
ATGACGCAGCGCAAAATCATCCACGTCGACTGTGATTGCTTCTACGCCGCCATCGAGATGCGCGATGACCCGAGCCTGGCGCAAAAACCGCTGGCCGTCG GCGGCTCGGCGGATCGGCGCGGGGTGATCGCAACCTGCAACTACGAAGCGCGGGCCTATGGGGTGCGTTCGGCGATGTCATCACGCCATGCCTTGAAGCT CTGCCCCGACCTGACCATCGTCAAGCCGCGCATGGATGCCTATAAGGAAGCGTCGAAGGAGATCCACGGCATCTTTCGCGACTATACCGACCTGATCGAG CCGCTTTCCCTAGATGAGGCTTACCTGGATGTCTCCGACAGCCCGCATTTTGGCGGCAGCGCCACGCGTATTGCCCAGGACATCCGCCGCCGGGTCTCCA ATCAGTTGCATATCACCGTGTCCGCCGGTGTGGCGCCCAACAAGTTTCTGGCCAAGATCGCCAGTGATTGGAAGAAACCCAATGGCCTGTTTGTGATCAC CCCGGACCAGGTCGAAGACTTTGTGTCGATATTGCCGGTGAAAAAGCTGCACGGCGTGGGCAAGGTGACCGCCGACAAGCTGGCGCGCCTGGGGATCGAA GACTGCCTGCAGTTGCGCGAATGGAACAAGCTGGCGCTGGTGCGCGAATTCGGCAGTTTTGGCGAGCGACTGTGGAGCCTGGCGCGTGGGATAGATGAGC GCGTGGTGCAGAACGACAGTCGTCGGCAATCGATCAGTGTGGAAAATACCTACGATGTGGACCTGCCAGATCTTTCAAGTTGCCTGGCGAAACTGCCTGA ACTGATGGAAACCCTGGCTGGACGCATCGCGCGCATCGACAGCAGTTACCGCGCGGGGAAGCCGTTCGTGAAGGTGAAGTTTCATGACTTTACCCAGACG ACCCTGGAGCAGGCGGGGGCAGGGCGGGACCTGGAGAGTTATCAACAGCTGATGACCCAGGCGTTCAATCGCGGTGGCAAGCCGGTGCGGTTGCTGGGGA TTGGGGTGCGGTTGCTCGACCTGAGCAGCGGCAATGAACAACTCGAACTCTCCTGGTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AACCCGGAAACCAAATGTGGGAGGGGCGGTGCGACGATTCGACTTGCTCCCGATAGCGGTGTGTCAGTCAACTAAGATGTTGAATGTGTCGCCGCTATCG GGGGCAAGTCGAATCGTCGCACCGCCCCTCCCACATTAGTCCTTTAGTGCTCCTGAGGGCTTAGCGTGCGCCAGGATCTGCGACGAGTCGCCCCGCGTCC TTGGTCAGCGCTTGCAGGAATTCCTGCTGCAACTCCGGATCATTGTGGGTCAGTTCGATCAGGCTCTGTTCCAGTTCGCTGGCTTCTTCCTCCAGGCCCA GCTCCGACAGGCGCTTGACCCGGTGGACCCACTGGCTGACTTCGTCGTCTTCCAGGTCGTCGTAGATCAGGCCGTGGGCTTCGAGCAACTTGCCGCGCAG TGTGTGGCTCACCGCCAGGGTCGAGTCCGAATGTACGTCGTCCTGGCCATCTTCCACGCTGATCTTCAAGGTACTGATGCGGTTCAGATCCTGCTCGGCA
|
|
| Amino Acid Sequence |
>DNA polymerase IV
MTQRKIIHVDCDCFYAAIEMRDDPSLAQKPLAVGGSADRRGVIATCNYEARAYGVRSAMSSRHALKLCPDLTIVKPRMDAYKEASKEIHGIFRDYTDLIE PLSLDEAYLDVSDSPHFGGSATRIAQDIRRRVSNQLHITVSAGVAPNKFLAKIASDWKKPNGLFVITPDQVEDFVSILPVKKLHGVGKVTADKLARLGIE DCLQLREWNKLALVREFGSFGERLWSLARGIDERVVQNDSRRQSISVENTYDVDLPDLSSCLAKLPELMETLAGRIARIDSSYRAGKPFVKVKFHDFTQT TLEQAGAGRDLESYQQLMTQAFNRGGKPVRLLGIGVRLLDLSSGNEQLELSW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|