Pseudomonas veronii 1YdBTEX2, H736_RS0101210
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas veronii 1YdBTEX2 Contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGCACCCTGGCCAGCTTTCCGGTGGCCAGCAGCAACGTGTGGCGATTGCCCGCGCCCTCGCCATGGACCCGATCGTCATGCTGTTCGACGAACCGACCTC GGCCCTCGACCCGGAAATGGTCAACGAAGTGCTGGACGTGATGGTGCAACTGGCCCAGGAAGGCATGACCATGATGTGCGTGACCCACGAAATGGGCTTC GCCCGCAAAGTGGCCGACCGCGTGATCTTCATGGACGCCGGCAAGATTATCGAAGACTGCCCGAAAGAAGAGTTCTTCGGCGACATCAGCGCCCGCTCCG AACGCGCGCAGCACTTCCTCGAGAAAATCCTGCAGCACTAAAAAAGCCACAGCTTGCTCCTCCTGTAGGAGCGAGCTTGCTCGCGAAAAACGGCAACGAT GACGCGCACATCCTGGATGAACGCGGTGCCCTTGGTTTTTTCGCGAGCAAGCTCGCTCCTACAGGAAGGGGTGAGCGGTAGCTGACCCAAGGCATCTGTG
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| DNA Sequence for Gene |
>H736_RS0101210
ATGAAATGCGACCCCAACCTCTATCGCGCCGCGCCGCCATCACTTGCCGTGAAGCCTCGTCTGATCCGCCAACTGTTCCTGCCGCCGTTGATCATCGCCC TGATGATCGGCCTGGGTTATATCGGCTTCTGGATCAGTGAGTACTATGGCATCCGCACCCTCAGCGATACCGGCGAACGCCAGCTGGAGCTGCATGCCCG CACCGTCGAAAGCGAACTGAGCAAATACACGTACCTGCCCAGCCTCCTGGAACTCGAATCCAGCGTGTCCACGCTGCTGGCCGAGCCGAACCAGGACACC CGCAAGACCGTCAACGACTACCTCGAAGGCCTGAACCGGCGCAGCCGCAGTCGGGCCATCTATGTGATGGACACCACCGGCCGCGTACTGGCTACCAGCA ACTGGCGCGATGCCGACAGCTACCAGGGTGAAGACCTGTCCTTCCGCGCCTATTTCCAGAACGCCGTGCGCGGCCAGCCCGGGCGTTTCTATGGCATCGG TAGCACCAATGGCGAACCCGGCTACTACCTGGCCCACGGCCTGGAAGAGCACGGCAAGATCATTGGCGTCGCTGTGGTCAAGGTCCGCCTCGAAGCGCTG GAGGAACGCTGGAAACGCGCGCGTCTCGAAGCGTTTGTCAGCGACGAGAATGGCATCATCATCCTCTCCAGCGACCCGGCCCGCCGCCTCAAGGCCGTGC GCCCCCTGAGCGATGAGACCAAGGACCGCCTGGCGCACAGCCTGCAATATTACTGGGCGACGCTGAACGAGCTGGAGCCCCTGGCCCGCGAGCGCCTCAA CGAAGGCACGGAAAAACTGACCTTTCCGGCCAACAGTGAAGTGGTGGCCGATGAGCACGAAGTCAGCTACCTGGCCCAGACCCGGCCGCTGAGCGACACG CCGTGGAATTTCACCCTGCTCACCCCGCTCAACGACCTGCGCCGTGCAGCGATCAACCAGGGCATCCTGGTGGCCGTCGCCTTTGGCCTGGTGGCGCTCC TGCTGATTGCCTGGAACGAACGACGCAAAGTCATCGCCACCCGCCTCGCCGCCCGGGAAGCCTTGCAGGAAGCCAACAGCCAGCTGGAACGCCGGATTGC CGAACGCACCGCCGACCTGCGCGCGAGCAACGAGCGCCTCAAGGGGCAGATTCGCGAACGCCGCCAGGCCGAGGAAACCCTGCGCCGCGCCCAGGATGAG CTGGTGCAGGCGGGCAAACTGGCGGCCATCGGCCAGATGTCCACCAGCATCGCCCACGAATTGAACCAACCCCTCGCCGCGTTGCGCACGTTGTCCGGCA ATACCGTGCGCTTCCTCGAACGCGGCGCGCTGGATACCGCCAGCGCCAACCTCAAGACCATCAACGAATTGATCGACCGCATGGGCCGCATCACCGCCAG CCTGCGCTCCTTCGCGCGGCGCGGCGACGACCAGGGCGAAGCCAACCTGGGCAAGGCCGTGGATGCCGCGTTCCAAGTGCTCGGCGCACGCCTCGACAGC CTGCCGCTGACGCTGCACCGCGACTTTGCCCCGGCCCAATTGCAGATCGACCAGACGCGCCTGGAGCAGATCCTGGTCAACCTGATCGGCAACGCCCTCG ATGCCATGCAAGCACAACCGGCGCCGGAACTGTGGCTGGAAGGCCACGAAGCCGACGGCAAATACCGCCTGCAGGTGCGCGACAACGGCCATGGCATCGA CCCCGAGGCGCGCAAGCATCTGTTCGAACCGTTCTTCACCACCAAACCCGGCGAGCAAGGCCTGGGCCTTGGCCTTACGTTGTCCGCCAGCCTGGCCGCG GCCACCGGCGGCAACCTCGCCGTGGAGCATCCCGTCGGTGGTGGTACTGCCTTTGTCCTGAGCCTGCCGCTGGTGGGCGCTCAAACAGCCGAGTCGTCAT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGTAGAAAAAAACCCTGACCTCACCGTCCTGATCGTCGAAGACGACCCCCACGTGCTGCTCGGCTGCCAGCAAGCCCTGGCACTGGAAGACATCCCCAG CGTCGGCGTGGGCAGTGCCGAAGAGGCGCTCAAGCGCATCGGCGAGAACTTTGCCGGCATCGTCATCAGCGATATCCGCCTGCCGGGTATCGACGGCCTG GAACTGCTCACCCGCCTCAAGGCTCTGGATAAAAGCCTGCCGGTGGTATTGATTACCGGGCACGGCGATATTTCCATGGCGGTCGGCGCCATGCGCAACG GCGCCTATGACTTCATGGAAAAACCCTTCTCTCCCGAACGCCTGGTCGACGTCGCGCGCCGCGCCCTGGAACAGCGCGGGCTGGCGCGGGAAGTCTGGGC CCTGCGCCGCCAGTTGGCCGAGCGCGACTCCCTGGAAGGACGCATCATCGGCCGCTCGCCGGCAATGCAGAACCTGCGCGAATTGATCGCCAACGTCGCG
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| Amino Acid Sequence |
>sensor histidine kinase
MKCDPNLYRAAPPSLAVKPRLIRQLFLPPLIIALMIGLGYIGFWISEYYGIRTLSDTGERQLELHARTVESELSKYTYLPSLLELESSVSTLLAEPNQDT RKTVNDYLEGLNRRSRSRAIYVMDTTGRVLATSNWRDADSYQGEDLSFRAYFQNAVRGQPGRFYGIGSTNGEPGYYLAHGLEEHGKIIGVAVVKVRLEAL EERWKRARLEAFVSDENGIIILSSDPARRLKAVRPLSDETKDRLAHSLQYYWATLNELEPLARERLNEGTEKLTFPANSEVVADEHEVSYLAQTRPLSDT PWNFTLLTPLNDLRRAAINQGILVAVAFGLVALLLIAWNERRKVIATRLAAREALQEANSQLERRIAERTADLRASNERLKGQIRERRQAEETLRRAQDE LVQAGKLAAIGQMSTSIAHELNQPLAALRTLSGNTVRFLERGALDTASANLKTINELIDRMGRITASLRSFARRGDDQGEANLGKAVDAAFQVLGARLDS LPLTLHRDFAPAQLQIDQTRLEQILVNLIGNALDAMQAQPAPELWLEGHEADGKYRLQVRDNGHGIDPEARKHLFEPFFTTKPGEQGLGLGLTLSASLAA ATGGNLAVEHPVGGGTAFVLSLPLVGAQTAESS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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