Pseudomonas taeanensis MS-3, TMS3_RS0116685

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0019752 carboxylic acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00377
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004451 isocitrate lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00463
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF001362 ICL IPR006254 Isocitrate lyase 3 279 1.6E-28
Gene3D G3DSA:3.20.20.60 - IPR040442 Pyruvate kinase-like domain superfamily 3 531 2.7E-126
PANTHER PTHR21631 ISOCITRATE LYASE/MALATE SYNTHASE IPR006254 Isocitrate lyase 3 530 2.0E-124
SUPERFAMILY SSF51621 Phosphoenolpyruvate/pyruvate domain IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily 10 514 1.66E-124
CDD cd00377 ICL_PEPM IPR039556 ICL/PEPM domain 63 386 1.70611E-34
Pfam PF00463 Isocitrate lyase family IPR006254 Isocitrate lyase 98 270 2.9E-19
PIRSF PIRSF001362 ICL IPR006254 Isocitrate lyase 288 415 1.1E-10
Pfam PF00463 Isocitrate lyase family IPR006254 Isocitrate lyase 331 399 1.0E-8
PIRSF PIRSF001362 ICL IPR006254 Isocitrate lyase 413 530 9.8E-8
Pfam PF00463 Isocitrate lyase family IPR006254 Isocitrate lyase 428 530 2.3E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.