Pseudomonas taeanensis MS-3, TMS3_RS0101115
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas taeanensis MS-3 contig_01, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCGATCTGCTCTGCTGCATGGGGCTCTCCACTATTTATTCTTGTAATTGTGAGCTCATCGGGCGTACAGGCCGGAGTACTTACACCGTCAGCTCGACAGC AATGGCACTGGCCTAGTGCGAAACCACTTTAGGCACAGCACCACACAGGCCGGGAACTGATTTGAACCTACGCCGGCAGGCACCCATACCGACCTTCGCC CAGACAACCAAACGCAGTGGTCGGGCAGCCGCTTGGCCATAGGAAATCTGGACCATTTCCAATTCTTGTCAAGCAAGACAGCCTCAAATATTTCCTGTTA GCTTTCCTAATTTAAGTATTTTTTCTTTGTATTTCATCTATTTAAAATCAATTAAAACCACATAAAAAACTTACTTGCGCAATTCGTAATCCACACCTAG ATTTAATCCTGTCACGCCTGACAGGATCAATGAATCCGCAGCCTGACCCAAAACAACACCAAGAACCGGCACAAGTCGGTCAGCCTGCGAGGAACCCGAC
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| DNA Sequence for Gene |
>TMS3_RS0101115
ATGTCTTTGTTGATCCGTGGCGCCACCGTAGTCACTCATGAAGAAAGCTACCCCGCCGACATACTCTGCGCCGACGGCCTGATCCAGGCGATAGGCCAGA ACCTGGAAACTCCGGGCGGTTGTGAAGTGCTCGACGGCGGCGGCCAGTACCTGATGCCCGGCGGCATCGACCCGCACACCCACATGCAGTTGCCGTTCAT GGGCACCGTGGCCAGCGAGGACTTTTACAGCGGCACCGCGGCCGGCCTGGCTGGCGGCACCACCTCGATCATCGACTTCGTCATCCCCAACCCGCAGCAA TCGCTGCTCGAGGCCTTTCATACCTGGCGTGGCTGGGCGCAGAAGTCCGCCGCCGACTACGGCTTCCACGTCGCCATCACCTGGTGGAGCGAGCAGGTGC GCGCCGAGATGGGCGAGTTGGTGGAAAAATTCGGGGTGAACAGCTTCAAGCACTTCATGGCCTACAAGAACGCCATCATGGCCGCCGACGACACCCTGGT GGCCAGCTTCGAGCGCTGCCTGGAACTCGGTGCCGTGCCCACGGTGCATGCGGAGAACGGCGAGCTGGTCGACCACCTGCAACGTAAGCTGCTAGCCCAA GGGTTGACCGGGCCCGAGGCGCACCCGCTGTCGCGCCCGCCGCAGGTCGAGGGTGAGGCCGCCAGCCGCGCCATCCGCATCGCCGAAACTCTGGGTACGC CGCTCTACCTGGTGCACGTCTCGACCCAGCAGGCGCTGGACGAGATCGCCTATGCCCGCAGCAAGGGCCAGCCGGTGTACGGCGAAGTGCTGGCCGGCCA TCTGCTGCTGGATGACAGCGTCTACCGCCACCCGGACTGGCAGACCGCCGCCGGCTATGTAATGAGCCCGCCGTTCCGCCCGCGCGAGCATCAGGCCGCC CTCTGGCACGGTCTGCAAGCCGGCAACCTGCACACCACCGCCACCGACCATTGCTGCTTCTGCGCCGAGCAGAAGGCCGCCGGGCGCGACGACTTCAGCA AGATCCCCAATGGCACCGCCGGCATCGAAGACCGCATGGCCGTGCTCTGGGATGAAGGGGTGAACAGCGGGCGTCTGTCGATCCATGACTTCGTCGCGCT GACCTCCACCAACACCGCGAAGATCTTCAACCTGTTTCCGCGCAAAGGCGCCATTCGCGTCGGCGCCGACGCCGACCTGGTGCTGTGGGACCCGCAGGGC ACTCGCACCATCTCGGCCAAGACCCATCACCAGCAGGTCGACTTCAACATCTTCGAAGGCAAGACAGTACGCGGCATTCCCAGTCACACCATCAGCCAGG GCCGCCTGGTCTGGGCCAATGGCGACCTACGCGCCGAACGCGGCGCCGGACGTTATATCGAGCGCCCGGCCTACCCGGCGGTATTCGACCTGCTGAGCAA ACGCGCCGAACTCGCTAGACCGACCGCCGTCGAGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCAAAGAACCTGTGGGAGCGGCCTCGGCCGCGAAAAATCCTGGAAGTCTCAGACCATTCGCGGCCAAGGCCGCTCCCACAACAAAGTGCTGCCACGTAC TTCGCCACAGCGGCCCACAGTGGCCGGGCGGCCGCTTATTCGCTGTTCATTGCCCAATAAAAGCCACAAAACCGGGAGACCACAACCGTGATCGACACCC TCAACCACCTGCCCCGACCGGATGCCGACGCAGCCGAACTGGCCGATCGCTTCGGCGATCTGGCGCCGCCCCTCAACGCGCGCCAGGCTGCACTGGAAAG CGCGCGCTGCCTGTACTGCTACGACGCGCCCTGCATCAACGCTTGCCCGAGCGAGATCGACATTCCTTCCTTTATCCGCAACATCAATCAGGAGAATGTC CAGGGCGCGGCGCAGAAGATTCTCTCGGCGAATATCCTCGGCGGTAGCTGCGCCCGCGTCTGCCCCACCGAAATCCTCTGTCAGCAGGCCTGCGTGCGCA
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| Amino Acid Sequence |
>phenylhydantoinase
MSLLIRGATVVTHEESYPADILCADGLIQAIGQNLETPGGCEVLDGGGQYLMPGGIDPHTHMQLPFMGTVASEDFYSGTAAGLAGGTTSIIDFVIPNPQQ SLLEAFHTWRGWAQKSAADYGFHVAITWWSEQVRAEMGELVEKFGVNSFKHFMAYKNAIMAADDTLVASFERCLELGAVPTVHAENGELVDHLQRKLLAQ GLTGPEAHPLSRPPQVEGEAASRAIRIAETLGTPLYLVHVSTQQALDEIAYARSKGQPVYGEVLAGHLLLDDSVYRHPDWQTAAGYVMSPPFRPREHQAA LWHGLQAGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVLWDEGVNSGRLSIHDFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQG TRTISAKTHHQQVDFNIFEGKTVRGIPSHTISQGRLVWANGDLRAERGAGRYIERPAYPAVFDLLSKRAELARPTAVER
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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