Pseudomonas sp. PAMC 26793, D109_RS0100695 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. PAMC 26793 ctg7180000039280, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCAAGCCGGGGCAACAGCCAGCCCACCGCAAAGGTGCCCACCGCGCCTACCGTCAAGACTTCGCGGTAATGCCCGCCTTCAAACTGGCCTAAGGTGTG AGCGATGCGGTCGAAGGATTCCCGCAGTACCGGCAGCAAGGTCTCGCCTTCGCTGGTGAGCATCAGGCCCCGAGGCAGGCGCTTGAACAGCGTGACATTG AGCTGCGCCTCCAGGCTTTTGACCTGGTGACTGACCGCCGCCTGGGTGACGCACAACTCAATCGCCGCCCGGGTAAAACTCAAATGCCGTGCGGAAGCCT CGAAGGCCCGCAGTGCGTTGAGAGGCAAATGGGAACGGAGCATGGCTTGACCCTAATTTTTCTAATGGCTGTTGCGAGATATCATCGTTTGCCGCCGGAT CACAAACTGCCTAAATTTGCGGCGCCTGCGCAGGCAACGGTATTCACCCGATCACCTTCATGGAAGTCACGTCATCATGTACACATCCATTTTCCCAACC
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| DNA Sequence for Gene |
>D109_RS0100695
|ampC
GTGCGCAAGACCACGATATTCGCCTTATTGCTCGGCGCCGGCAACTGCATGGCGGCTACCGACATACGCCAGGTCGTGGACAGTACTGTCCAGCCCCTGA TGCAGCAACAGGACATCGCCGGCCTGTCGGTGGCGATCGTACAGAACGGCAAGGCGCAATACTTTAACTACGGCGTCGCCAACAAGGACAGCCAGCAGCC GGTCACCGAAAACACCCTGTTTGAAATCGGCTCGGTAAGCAAGACCTTCACCGCCACCCTCGCCGGCTATGCCCTGGCCAACGGCAAGCTGAAACTGTCA GACCCGGCCAGCCAATACCTGCCGGCATTGCGCGGCGACAAGTTTGACCACATCAGCCTGCTCAACCTCGGCACCTACACTGCGGGTGGCTTGCCGCTGC AATTCCCCGAAGAGTCCGATAACACCGGCAAGATGATCAGCTATTACCAGCACTGGAAACCGGATTTCGCCCCCGGCACCCAACGCCTCTACTCCAACCC GAGTATCGGCCTGTTCGGCCACCTGGCAGCGCAAAGCCTGGGCCAGCCGTTTAACCGTTTGATGGAGCAGACCCTGCTGCCGAAACTCGGCCTCAAGCAC ACCTTTATCACCGTGCCCAAGGCGCAAATGAACCTGTACGCCCAAGGTTACGACAAGGCCGGCAAACCAGTGCGCGTCGGCCCTGGCGCCCTGGACGCCG AAGCCTACGGCATCAAGACCAGCACCTCGGACCTGATTCAGTACGTTGAAGTGAACATGCACCCGGCGAAGCTGGAAAAGCCCCTGCAACAGGCGATTGC CGCGACCCATACCGGGTACTACACGGTGGATGGCATGACCCAGGGCCTCGGCTGGGAGATGTACCCCTACCCGATCACGCTGGATGCATTGACTGAAGGC AACTCGGCGCAAATGGCCTTCCAGCCCCACAAGGTCAGCTGGCTGACACAACCGCAAGCGCCCCATGCCGACACGCTGGTGAACAAGACTGGCGCCACCG GTGGCTTTGGCGCCTACGTGGCGTACGTGCCAAGCAAAGGCCTGGGGGTGGTGATCCTGGCGAACAAAAACTACCCGAATGCCGAACGGGTGAAAGTGGC CCATGCAATCTTGAGTGCGATGGATAAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATCCCTGCATAAATCAAATGTGGGAGCCGGGCTTGCCCGCGATGGCGGTGTATCAGTGGGCACCTGTGCTGGCTGACACGCCCTCATCGCGGGCAAGCCC GCTCCCACATTGTTTTGTGGTGTGATTTAAAGTGGGTTTACATCCCCAGCCAGTGCGGCAAGGCCAGGGAGATGAACGGCAGGTAGGTCACCATGATCAG GAACACCAGCAGGATCATCAGCCACGGCAACGCCGCGCGAATGGTCTGCCCCAGGGTCAGCCCGGTCACCGCCGAGGTCACAAACAGGTTCAGCCCCACC GGCGGATGCACCAGGCCAATCTCCATGTTGACCACCATCACAATCCCCAGGTGAATCGGGTCGATCCCCAGCTTCATCGCGATCGGGAAGAAGATCGGCG CCAGGATCAGCACAATCGCCGACGGCTCCATAAAGCTGCCCGCCACCAGCAACACCACGTTGACCATGATCAGGAAACCAATCGGCGTCAGGCCTTCGGA
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| Amino Acid Sequence |
>beta-lactamase/D-alanine carboxypeptidase
MRKTTIFALLLGAGNCMAATDIRQVVDSTVQPLMQQQDIAGLSVAIVQNGKAQYFNYGVANKDSQQPVTENTLFEIGSVSKTFTATLAGYALANGKLKLS DPASQYLPALRGDKFDHISLLNLGTYTAGGLPLQFPEESDNTGKMISYYQHWKPDFAPGTQRLYSNPSIGLFGHLAAQSLGQPFNRLMEQTLLPKLGLKH TFITVPKAQMNLYAQGYDKAGKPVRVGPGALDAEAYGIKTSTSDLIQYVEVNMHPAKLEKPLQQAIAATHTGYYTVDGMTQGLGWEMYPYPITLDALTEG NSAQMAFQPHKVSWLTQPQAPHADTLVNKTGATGGFGAYVAYVPSKGLGVVILANKNYPNAERVKVAHAILSAMDK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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