Pseudomonas aeruginosa 19BR, IAI_RS0104365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa 19BR 19BR chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGGCCACGCCCTCGGCGCTCGCCTTCATGCCTTTCTGGCCCTTGCGCCAGCCGGCCGGGCAGACCTCGCCGTGTTCCTCGGTGAACTGCAGGGCCTCGAC CAGGCGCACCATCTCGTCCACCTCACGCCCCAGCGGCAGGTTGTTCACCACTTGGTGCTGGACCACCCCGGCGCGGTCGATCAGGAACGAAGCACGCAAG GCCACGCCGTCCTCGTGCTCGATGCCGTAGGCGCGGGTGATCTCGTGCTTGACGTCGGCGACCATGGTGAACTCGACCGCACCGATGCCGCCCTTCTCCA CCGGCGTGCTGCGCCAGGCGTGATGGGTGAACTGCGAGTCGATGGAGACACCGACCACCTCGACGCCCAGCTCGCGGAACTTATCCATGCGGTTATTGTG GGCGATGATTTCCGAGGGGCAGACGAAAGTGAAGTCGAGCGGCCAGAAGAACAGTACGACGTACTTGCCGCGCAGGCTGGAAAGCTGGAAGGCATCGACG
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| DNA Sequence for Gene |
>IAI_RS0104365
ATGGAACCGTCGCCGAGGACCGCGGCGGCAGTGAAATCGGGGGCTTGCTTGTTGACCAGTACGCTCATCGCGAGGCTCCTAGAAGGTTGGGTTGCGCCCG GCGACGCCAGGCTCCCGGAAGAATATGCAGCGCAGGTTACCCAGCCACGACGATGCATTGAAATGTCGAATTTCAATTCGCACGATAGAGTCAGCCTATG CTCTCAACCTGCGGCTAGACTCATGCTGTCGCCCATTACCCGTCCTCACCGCATGCCCCTACGCACACGCCTGCTCTGGCTGTTCCTGCCGTTGCTGGCC GCCAGTCTCGGCGGTATCTGGCTCTTGTCGGAAAGCATCCTGCTGAGCCGTTTCGACCGAGAGGACCAGCAACGCCTGCAAGAGGGCGCCACCGTCCTGC ACAACCGGCTGGACTTCGAGTTGAAGCGCCACCTGGACATCGTTCGCACCTACGCTTGGTGGGATGCCAGCTACGACTTCATCCAGCGCCCCAACGAGAC CTTCGAACAGGAAAACCTCGACCACGAGATGCTCGACGACCTGGGATTCGACTTCGTCCTGTTCCTCGACGACCGGGGTCACCTGCAACTGAAGCAGTGG TCCCCGCCCGCGCCCGACCAGCGCGTGCTCTTCGGCGCCCCCTCGGCGAGCGACCAGGCCCTGCTCGAGGCACTGCAGCAACGCGCCATCCGCCTCGGCG CGCTGGACTTTCGCGGACGCACCGACCACAGCCTGAGCGAGCTGCTGCTGGTCGACAACCTGCCGACCCTGCTGGTCAGCGTGCCTATCAGCAACAACCA GGGTAGCGCGCCGGCGAAGGGCGCGATCCTCGCCGGCTACTTCCTCGACCGGGAACGCCTGGCCAACCTCCGCGAACAGATGCAGGCCGACCTGCAACCG ATGCCCAACATCGCCACCGACTCCACCTGGAAGCCGATGCGCAGCCGCAGCGGCAGTACCCACAACCAGGCCCTGCTCAGCCCACGGCGGTTCATCGGCG AACATGTCCAGCAGGTCTCGGTGCAGTACCTGAGTTCCAGCGGCGAGCCGCAGCTGCGCTTCGACATCACCAAGAAACGCCTGCTCTACATCCAGGGCGA GAAGGCCATCAACTTCTTCCTCGGCGCCTCCCTGCTGGTCGCGCTGGGCGCTTTCCTGGTCGGCTACCTGGCCCTGGAGCTGTGGGTCCTGCGCCGGGTC CAACGGCTCAACCGGGAGGTCGCCGAAGTCGGACGCAACGCCCACTCGATACGCCTGAGCGACTTCGGCAACGACGAGCTGGGACAACTGGCGGGCGAGA TGAACCAGATGCTCGAGCGCCTGGAACACAGCGAGGCGCGCGACCGGGCGATCCTCCAGTCGATGCGCGACGGCTACTTCGAAATGGACGTCGACGGCGT GATCCTCACCGTCAACCCCGCGCTCTGCCAACTGCTCGGCCAGACGCGCGAAACGCTGATCGGCCATCCCTACTACGAACTGCTCGGCGAAGACGACCTG GCGCGTGCCCGCCAACCCTTCCAGCGCGCCATGCAGAGCGGCGCAGGCAAGACCTTCGCCATCCCCCTGCAGCGCGCCGACGGCAGCCTCGGCTACTTCG AGGCCACGGTTTCGCTGATCCACGACCTGCAGGGCGAACTACGGGGCTACCGCGGCATCGTCCGCGACGTCAGCGACCAGATCGCCTACCAGCAGCAATT GCTGGAAATGGCGTACCGCGACCCGCTGACCGGCCTGGGCAACCGCAAGGCCTTCGACGAACAGCTCGGCCAGGCGTTGCTTCGCGCCGGCTCCGGCGGA AGCGAACTGGCGCTGCTGTACCTGGACCTGGACCGCTTCAAGGAGGTCAACGACCGCTTCGGCCACGACATCGGCGATGCCCTCCTCAGGACCGTCGCCG AACGGGTACGCAGCACCCTGCGGCAGCCGGACAAGGCCTACCGCCTGGGCGGCGACGAATTCGCCGTGCTCCTCGAGGACAGCCAGGAAAACAATCCGCA GCGCCTCGCAGAACGCCTGCTGGCGGCGCTGGTCCAACCGATCGCGCTGAATGGCGAACGCATCGACTTCGTCACCCCGAGCATCGGCATCGCTCTCTAC CCGCGGCATGCCGGCGATGCCGAAGGACTGGTCCGTGCCGCCGACAGCGCCATGTACGAGGCCAAGCGCCAGCGCAACCACTATTGCCTGTACCAGGCGC CAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGCGCGGTCAAACAGGCTCTGTCGCGGGCTTTCGCCAGTCTGCTAAGGTTTCAGCCCGCATCCCATCGGAGAACCATTCCCTATGCCAGCCCTGAGCG GCCCGCAATACCTCGGCGAAGGCCTGAAGCTGATCATGCGTCCCGGCCTGCGCCTGTTCGTGCTGATCCCCCTGACCCTCAACCTGCTGGTGTTCGCCCT GCTGATCGGCTTCGCGATGCAGCAGTTCAGCCACTGGGTCGACCTGCTGATGCCCAGCCTGCCCGACTGGCTGAGCTTCCTGCAGTACATCGTCTGGCCG TTGTTCGTCCTGCTGGTGCTGGTGATCGTGTTCTTCACCTTCACCATGGTCGCCAACATCATCTCCGCGCCGTTCAACGGCTTCCTCTCGGAAAAGGTCG AGGTGGTGGTTCGCGGCCGCGACGACTTCCCGCCGTTCAGCTGGGCCGAACTGCTGGCGATGATCCCGCGCACCATGGGTCGCGAGATGCGCAAGCTCGC
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| Amino Acid Sequence |
>hypothetical protein
MEPSPRTAAAVKSGACLLTSTLIARLLEGWVAPGDARLPEEYAAQVTQPRRCIEMSNFNSHDRVSLCSQPAARLMLSPITRPHRMPLRTRLLWLFLPLLA ASLGGIWLLSESILLSRFDREDQQRLQEGATVLHNRLDFELKRHLDIVRTYAWWDASYDFIQRPNETFEQENLDHEMLDDLGFDFVLFLDDRGHLQLKQW SPPAPDQRVLFGAPSASDQALLEALQQRAIRLGALDFRGRTDHSLSELLLVDNLPTLLVSVPISNNQGSAPAKGAILAGYFLDRERLANLREQMQADLQP MPNIATDSTWKPMRSRSGSTHNQALLSPRRFIGEHVQQVSVQYLSSSGEPQLRFDITKKRLLYIQGEKAINFFLGASLLVALGAFLVGYLALELWVLRRV QRLNREVAEVGRNAHSIRLSDFGNDELGQLAGEMNQMLERLEHSEARDRAILQSMRDGYFEMDVDGVILTVNPALCQLLGQTRETLIGHPYYELLGEDDL ARARQPFQRAMQSGAGKTFAIPLQRADGSLGYFEATVSLIHDLQGELRGYRGIVRDVSDQIAYQQQLLEMAYRDPLTGLGNRKAFDEQLGQALLRAGSGG SELALLYLDLDRFKEVNDRFGHDIGDALLRTVAERVRSTLRQPDKAYRLGGDEFAVLLEDSQENNPQRLAERLLAALVQPIALNGERIDFVTPSIGIALY PRHAGDAEGLVRAADSAMYEAKRQRNHYCLYQAPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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