Strain | Pseudomonas stutzeri B1SMN1 contig00024, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTGCGCCCCCGGATGGTTGGGTGAACTCGACCGGGCCGGCATCCCCAATGCCTGGAGCGACGACATCCTCGGCCGACTGTGGCGCAAGCTCGCGCTGAAC TGCGCGATCAATCCGCTCACCGTCCTCCACGACTGCCGCAATGGCGAGTTGCGCCAGCACCGCGCTCAGCTCGCCGCGCTCTGCAACGAACTCTCGCGGC TGCTCGCTGCCTGCGGCCAGCACGCGGCAGCCGAGGAGCTGGAAAGCGACGTGTGGCGAGTAGTCGAAGCGACCGCCGCCAACTACTCATCGATGCACCA GGATGTCCGGCTCGGCCGCCGCACCGAAATCGCCTACCTGCTTGGCCATGCCTGCACAACCGCCGATGCGCTGGGCGTCGCCGTTCCGAGGCTGCACGAT CTGCATGACCGTCTGCGGGAGTACCTCGGCCTGCGCGGATTGCCCACGGACTGAGCGACGGCTACCCTGCTGAAACCCTCCGCCAAGCCGTGCCCGTTCC
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DNA Sequence for Gene |
>B382_22586
ATGAAGCTGCGTCAGCGCCTCGAAAATCTCCCGGTCGGCCGCAAGCTGCTGCTCGCCCTGCTCGTCCTGCTCGCCGCCGTGCTGCTGGTATCCAACCTCA CCTTCATCAGTGCCGCCTACTGGATCTCGCGGCAGAGCGTCGCCCCGCAAGCCATGCACACGCTTGGCGAACTCTTCGCCACCGAGGAGCTGAGCAGCCG CGCCCTGTCCTCGCCCGAGGCAGCCAGCGAGTTGCTCAGGCGCCTGGACGGCTATGCTCCGCTGCGCGCAGCAGTGATCTACGACCGCGACGGCAACAGC CTTGCGCAGCTGCAGCAGGGTGAGCGGCTGCGGCTGCCGGAGCGGATCGACAAGGTCGCCGACTGGCGCGCCGGCGAGATCCGCGCCAATCTGCTGGTTC GCTTGCCGCAACCGGACGGCAGCGCCGGGCATCTGCTGATGGTCGCCAGCAGCGAACTGCCCGGGGCGTTCTACACCGGCACGCTGACCGCGAGCCTGGC GATCCTCGTGGCCAGCCTGCTGCTGTGGGTTCTGGTCGCCCGGCAGATCCGCCAGCTGATCACGCGGCCGATTCGCGACCTCGAAGCGTTGTCCCGCCAG GTAACCCGCGAGGAAAACTACTCGCTGCGGGCCAAGCCCGGCAACCAGGACGAGATCGGTCGCCTGGCCGACGCGTTCAACACCATGCTGTCACGCATGG AGGCTCGCGAGCAGCAGCTCAAGCGCGCCCGTGACGATGCCCAGGAAGCCTTCGATCACGCCCAGGGGCTGGCCGAGGAAACGCGGCACTCCAACCGCAA GCTGGAGCTGGAGGTCCAGGTTCGCAGCAAGATCGAGCAGAAACTCACCGGTTTCCAGAAGTACCTCAACAGCATCATCGATTCGATGCCCTCTGCGCTG ATCGCCCTCGATGAGCAGCTCTACGTCACCCAATGGAATCAGGAAGCCAGCGCCCTTTCCGGCACGCCGCTGGACGACGCGCTGAATCAGCCGGTGTTCG TCGCCTTCGAGCCGCTCAAGCCCTTCCTGGCGCAGATCCGCCGCACTTCCGAGCAGCACGTGGTGGAAAAGATCGAGCGGGTGACCTGGCCGCGCAACGA CGAGCCGCACCACTACGCACTGACCTTCTACCCGCTCAGCGGGGCAGGTGGTCGCGGCGTGGTGATCCGCATCGACGACATCACCCAGCGCATCAACATG GAAGAGATGATGGTGCAGTCGGAGAAGATGCTCTCGGTGGGCAGCCTGGCCGCCGGCATGGCTCACGAGATCAACAATCCCCTCGGCGCCATCCTGCACA ACGCACAGAACATCCGCCGCCGGCTTTCGCCCGAACTGGAACGCAATCGCGAGGCAGCGGAGGAAACCGGCGTGCGCCTGGAGGCGGTCAACCAGTATCT GCAACGCCGCGAAGTGCCGCAGTTGCTCGACGGCATCCAGCAGGCCGGCTCCCGGGCCGCGAAGATAGTCAGCCATATGCTCAGCTTCAGTCGCATGAGC AACCGGCAGCTGGCTGACTGTCAGCTGCCGATGCTGATCGACCAGGCGCTGGAGATCGCCGGCAACGATTTCGCCCTGATGGAGGGTTTCGATTTCAGGT CGATCGAGATCGTTCGCGACTTCGATCCGCAGATCGATCGCGTACCCTGCATCGCCAACGAACTGGAACAGGTCCTGCTCAATCTGCTGAAGAACGCCGC CCAGGCAATCCACCAGAACCAGGCTCAGGAACGCGGACGCATCATCCTGCGCACTCGACTGAACCCGCCATGGGCGGAGATTCAGGTCGAAGACAACGGT GGCGGCATTCCGGAGAACGTTCGCAAACGCATATTCGAACCGTTTTTCACCACCAAGGAAGTCGGTCAGGGAACCGGACTGGGCCTTTCCGTCTCGTATT TCATCATTACCAACAACCACCAGGGCCAGATGGAGGTGCAGTGCCAACCCGGCCATGGCTCCACCTTTACCCTGCGCCTGCCACTGAGTTCGCCTGGCGA GCCGCCGGCGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACAAGGAACCAATAGATGGGCAATCGACTGTCGAAGATCTATACCCGTACCGGCGATAGCGGTGAAACCGGCCTCGGTGACGGGCGCCGGGTCGCCAAGG ATCATCCCCGTGTAGAAGCCATGGGCGAGGTCGACACGCTCAACAGTCAGCTCGGTCTGCTGCTTGCCGAACTGGCTGAGGCGCAAGTGCAATGGCCTGC GCTCGATGAGCTGATCAGCGTGTTCGGCCCTTGTCAGCACCGCCTGTTCGATCTTGGCGGCGAGCTGGCCATGCCCGATTACCAGGCGCTGCAGGAAAGC GAGATCGAGCGCCTGGAGCAGGCCATCGACAGCTGGAATCAGGAGCTGGGGCCGCTCAAGGAGTTCATTCTGCCGGGCGGTTCCAGGCTCATCGCCCTAG CCCACCTGTGCCGCAGCGTGACGCGCACTGCCGAGCGCCGCTGCCAGCAGCTCAATGCCAGCGAAGTCTTGCGCCCGGTGCTGCTGGCCTATCTGAACCG
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Amino Acid Sequence |
>sensory box histidine kinase/response regulator
MKLRQRLENLPVGRKLLLALLVLLAAVLLVSNLTFISAAYWISRQSVAPQAMHTLGELFATEELSSRALSSPEAASELLRRLDGYAPLRAAVIYDRDGNS LAQLQQGERLRLPERIDKVADWRAGEIRANLLVRLPQPDGSAGHLLMVASSELPGAFYTGTLTASLAILVASLLLWVLVARQIRQLITRPIRDLEALSRQ VTREENYSLRAKPGNQDEIGRLADAFNTMLSRMEAREQQLKRARDDAQEAFDHAQGLAEETRHSNRKLELEVQVRSKIEQKLTGFQKYLNSIIDSMPSAL IALDEQLYVTQWNQEASALSGTPLDDALNQPVFVAFEPLKPFLAQIRRTSEQHVVEKIERVTWPRNDEPHHYALTFYPLSGAGGRGVVIRIDDITQRINM EEMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSPELERNREAAEETGVRLEAVNQYLQRREVPQLLDGIQQAGSRAAKIVSHMLSFSRMS NRQLADCQLPMLIDQALEIAGNDFALMEGFDFRSIEIVRDFDPQIDRVPCIANELEQVLLNLLKNAAQAIHQNQAQERGRIILRTRLNPPWAEIQVEDNG GGIPENVRKRIFEPFFTTKEVGQGTGLGLSVSYFIITNNHQGQMEVQCQPGHGSTFTLRLPLSSPGEPPAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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