Pseudomonas stutzeri B1SMN1, B382_01340
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri B1SMN1 contig00001, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGCGCTCGGTGGCGGAGTTCACCCCCGCCGAGCTGGCTGCCATCTATACCGACCTGTTCGAGCGCCGCTGGGGCTTCGAGGTGCCAGGCAAGTCCCAC CTGATCGAGGTATTCAGCCTGTTGCAGGATTTCCTGCGTGGCTCGTTGCTGATGCTGGACGGTTTTCCCGTGGCCGTTCAGGTGCTGTACAGGGTCGAGT CGTTAGGCTGGATCAGCTACGAGTACATCAATGGTGGTGTCGACCCCCGCACCCATCATTTCAGCCCCGGCAGCGTTCTCAGCTTCATCAATACCCAGGC CGCCTGGGCGGATGCGCGGAGCCTGGGCAAACCCCTGCGTTATTCCTTCGGCCGAGCCGATTGCGAATACAAGGACCGCTGGTGCCATCGTGTGCCGGTA TACCAGTCATGATCAGGCTCCTATGTCCAATCGCAAGCAAGAGTTGTTGAAGCGTCACCGTCGTAACAAGCGTCTAGTGCTTTCTCTTGCTGTCCTTGTC
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| DNA Sequence for Gene |
>B382_01340
ATGGCGGCGTTCTTGGACAACAGCGTCGTCAATATCGGCCCCTGGTGGGTGGCGCCCTTGCTGGCGCTGGCATTCTGGCTGATCCACGAGGCCTGGTTCG CCGATCACTTGTTCTATTCACCCACGGAATCCTATGAGTACGCCTTCCCGCCGGGGACTCCCAGCCTGCCGATCGAAATCGTGGCGGGCGTGCCGAGGTC AGCGACCGGGACTGCTCTGCCTGCCGGCAGTGAAACCCTGATCCTGAAGGTGAGGGTGCGCAGCACCTGGCTTGGTTGTTTGTTCGATCCGCGCATCCAC ATAGACCGGCCGGGTCTGGCTGACCGGCAGGATTTCGAACGGCGCTGCAGTGGCTGGCGTTACCTGAACCTTTCTGGCTGCGAAGCTGCACTGAACGCCG GGACGATCCGGCTGCGGGGACGTTTCCTGCGTATGGCGCCAGAGGCAGAACTCTATTGCTTCAGCAATCCGGACTATGCACAGCGTCGAGCGATGATCAT CGCCCCCCATGCCGACGATGCGGAGCTCGCGGCGTTCGGTTTCTACAGTCGCTGCCGTGAAGTTTCCATCGTGACGCTCACCCAAGGAGAGATCGAGGCC AGGTACTACCGCAGATTGGGGCTCGATAAGGAGGGTGCCGCCCGTTTGAAAGGTCGCCTGCGCGCCTGGAACAGCCTGGCCGTACCCTTGTGGGGTGGCG TGCATGGACACGACTGCCTGCAGCTCGGTTACTACTGCCTGCGCCTGGCGCAAATGCGGGCCAGCCCGGATCAGGCTTTCGGCTCGCTGGAGTCGGGGGA GCGGGATATCCGCAATGTACGCCGGCTCAATGAGCGCCCCTTGCCGGGCGATCGCGACGGTGCTTCCAGCTGGAAGAACCTGATTGCCGATCTGGTCTGC CTGCTGGAACACTACCGCCCGGAGGTATTACTGGTCCCCCATCCCGAGCTCGATCCCCACGCGGACCATGTGCATGCGACGATCGCCGTCGATGAAGCCA TCGGGTGCTCCAATTGGAAACCGGCCGTCCAGCTCCTCTACGCTAACCATCTGTATGACAACGATCGCTGGCCCATGGGGCCGGCCGATCATGGCGTGGC ACTCCCGCCTGTGTTCGGTACGTTGCCGTCGCATGCTCTCTGGAGCCCGCAGCTTTCGCCGGAAACCTGCCTGGACAAAGCCATGGCGCTGGCCATGCAG CATGATCTGCAGGTTCCCTTGCCTTTGAAGAAGCGCATCCGCCGGCATATCCAGCGCATTCTGATTGGCCGCCGCTGGCCTACCACGGGCAACGATGAGT TCTTCCGCAAGGCCGTGCGTCGGCACGAGCTGTTCTGGGTGCGCAAGCTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGTAGTTGGCCGCGTGTCCCTGCTGCCTGGCGCTCGGCTCTCGCATGTTATGATCGCTGCCGTTTCTCTTCCTCTCCGGAGCCCCCATGAAGCTGACCA TGCCCCGTTTCGACCAAGCCCCCGTTCTGGTGGTGGGCGATGTCATGCTCGATCGCTACTGGCATGGCGGTACGTCGCGGATTTCGCCGGAAGCGCCGGT GCCGGTGGTCAAGGTCGAGCAGATCGAGGATCGTCCCGGTGGTGCGGCCAACGTGGCGTTGAACATCGCTGCGCTGGGCGCTCCCGCTTCGCTGGTGGGG GTGGCTGGTGAGGATGAGGCGCGCCAGAGCCTGGCCGACAGCCTCGCTGCGGCGGGTGTGCGGGCACATTTCCAGTGCCTCGAGCACCAGCCGACCATCG TCAAGCTACGGGTGATGAGCCGTCACCAGCAACTGCTGCGCATGGATTTCGAAGAGCCGTTCGATACCGATCCGGATGCCTTGCTCGCTGAGGTGGAAAG
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| Amino Acid Sequence |
>LmbE family protein
MAAFLDNSVVNIGPWWVAPLLALAFWLIHEAWFADHLFYSPTESYEYAFPPGTPSLPIEIVAGVPRSATGTALPAGSETLILKVRVRSTWLGCLFDPRIH IDRPGLADRQDFERRCSGWRYLNLSGCEAALNAGTIRLRGRFLRMAPEAELYCFSNPDYAQRRAMIIAPHADDAELAAFGFYSRCREVSIVTLTQGEIEA RYYRRLGLDKEGAARLKGRLRAWNSLAVPLWGGVHGHDCLQLGYYCLRLAQMRASPDQAFGSLESGERDIRNVRRLNERPLPGDRDGASSWKNLIADLVC LLEHYRPEVLLVPHPELDPHADHVHATIAVDEAIGCSNWKPAVQLLYANHLYDNDRWPMGPADHGVALPPVFGTLPSHALWSPQLSPETCLDKAMALAMQ HDLQVPLPLKKRIRRHIQRILIGRRWPTTGNDEFFRKAVRRHELFWVRKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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