Pseudomonas stutzeri NF13, B381_20786
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri NF13 contig00108, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGGTCCGATGCTGCTCAAGGTCAACACACCGATCACTGACGACGACAGCGGCGGCACGCTGCACGACCGTCTCGCCGTACTCGGCTCGCAGGCCGTGG TGCAGGCGGTCGATGCCCTGGCCGACGGCACGCTCGCAGGGGAAGTGCAGGACGATCGCCTCGCCACCTATGCGCACAAGCTGAGCAAGGACGAAGCCCG CATCGACTGGACCCGCCCGGCGCTCGAGCTGGAGCGGCTGATCCGTGCCTTCAACCCCTGGCCGATCTGCCACAGCACGCTCAATGGCGAAACGCTGAAG ATTCACGCCGCACGCCTCGGCGAGGGCCAGGGCGAGCCCGGGCACATCCTCGAAGCGAGCAAGGCCGGACTGACCGTTGCCTGCGGTGAAGGCGCCCTGT CGCTGACTCGCCTGCAGCTGCCCGGCGGTAAGCCACTGGGCTTCAGCGACCTGTACAACAGCCGCCGCGAGCAGTTCGCCCCCGGCCTGGTGCTCGGTCA
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| DNA Sequence for Gene |
>B381_20786
ATGAACCCGCGCCTGGCCGCCGCCCGTGCGCTGAGCGTCGTGCTCTCGGGCAAAGCCTCGCTGGGCAGCAGCCTGCCGGAGGTCCTGGGCAAGGTCGACG CCCGCGACCGCGGCCTGACCCAGGACCTGGCCTTTGGCACCGCGCGCTGGCAGCCACGCCTGGCCGGCCTGGCTGACAAGCTGCTGCAGAAGCCATTCAA GGCTGCCGATCGCGATGTCGAAGCCCTGTTGCTGGTCGGCCTGTATCAGCTGCTGCATACCCGCATCCCGGCCCATGCCGCCATCGGCGAAACCGTCGGC TGCGTCGACAAGCTGAAGAAGCCCTGGGCCAAGGGCCTGCTCAACGCCGTGTTGCGCCGCGCCCAGCGTGAGGGCGAAGCCCTGCTGGCCGAACTCGAGC ACGATCCGGTGATTCGCGTCGCTCACCCGCGCTGGCTGCAGAAGGCGCTCAAGGCCCACTGGCCCGAGCACTGGGAAGCCATCTGCGCGGCCAACAACGC GCACCCGCCGATGATGCTGCGGGTCAATCGCCGGCAGGTCAGCCGCGACGCCTATCTGGCTGAGTTGCAGGCCGCCGGAATCGACGCCCATTCGTGCGAG CTCAGCGAGGACGGCATTCGCCTGGCCGCGCCGTGCGACGTGCATCAGCTGCCCGGCTTTGCCGAAGGACGGGTCAGCGTGCAGGACGAGGCCGCACAGC TGGCCGCCGCGCTGCTCGACCTGGCGCCGGGCCAGCGCGTGCTGGACGCCTGCTGCGCACCGGGTGGCAAGACCTGCCATCTGCTCGAGCGCGAGCCACA GCTGGCCGAACTGGTTGCGCTGGATCTGGAACCCAAGCGATTGGTGCGCGTGCGGGAAAACCTCGAGCGCCTGCAGCTCAACGCCGAACTGGTCGCCGAC GACGCCCGCGCCACCGAGCGCTGGTGGGACGGCAAGCCGTTCCAGCGCATCCTGCTCGACGCGCCCTGTTCGGCCACTGGCGTGATCCGCCGCCACCCGG ACATCAAGTTGACACGCCAGGCCGATGACATCGCCCCCCTTGCCACGCTGCAGGGCGAGATGCTCGATGCGCTGTGGCCGACCCTCGACGTCGGCGGCGT CCTGCTCTATGCCACCTGCTCGGTGTTGCCGACCGAGAACCGCGAGGTGATCGGCGCCTTCCTCGAACGCACGCCCGGCGCCCGTGAGCTGGATCTGCCA GGCGGCTTCGGCCTGCAGCAGCCGCATGGTCGCCAGCTGCTGCCGCAGGAGAACGGCCACGACGGCTTCTACTATGCCAAGCTGATCAAGATCGCGGCCC AGCCACGTGGCGTCAGTGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGAAACCCCGGCGCGGTGCGCGCGGGCCCAACATGGAAGCGGCGGCAAGCGTCCGCCTCTCAGGAGTGATCGCGTGAAGATCATCATTCTCGGCGCCG GCCAGGTCGGCGGTACCCTCGCCGAACACCTCGCCAGCGAAGCCAACGACATCACCGTGGTCGACACCGACGGCGACCGTCTGCGCGATCTCGGCGACCG ACTCGACATCCGTACCATCCAGGGACGCGGCTCCTTCCCCACGGTCCTGCGCCAGGCCGGCGCAGACGACGCCGACATGCTGGTGGCGGTGACCAACAGC GACGAAACCAACATGGTCGCCTGCCAAGTCGCCTACACCCTGTTCCATACGCCGACCAAGATCGCCCGCGTGCGCGAAGCGGCCTATCTGGTGCGCTCCG GTTTGTTCGCCAACGAGGCGATCCCGGTCGATGTGCTGATCAGCCCGGAGCAGGTGGTCACCAACTACATCAAGCGCCTGATCGAGCATCCCGGCTCGCT
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| Amino Acid Sequence |
>16S rRNA methyltransferase B
MNPRLAAARALSVVLSGKASLGSSLPEVLGKVDARDRGLTQDLAFGTARWQPRLAGLADKLLQKPFKAADRDVEALLLVGLYQLLHTRIPAHAAIGETVG CVDKLKKPWAKGLLNAVLRRAQREGEALLAELEHDPVIRVAHPRWLQKALKAHWPEHWEAICAANNAHPPMMLRVNRRQVSRDAYLAELQAAGIDAHSCE LSEDGIRLAAPCDVHQLPGFAEGRVSVQDEAAQLAAALLDLAPGQRVLDACCAPGGKTCHLLEREPQLAELVALDLEPKRLVRVRENLERLQLNAELVAD DARATERWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQADDIAPLATLQGEMLDALWPTLDVGGVLLYATCSVLPTENREVIGAFLERTPGARELDLP GGFGLQQPHGRQLLPQENGHDGFYYAKLIKIAAQPRGVSG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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