Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 assembly GCF_00068827, Q378_RS0113585

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas plecoglossicida NBRC 103162 = DSM 15088 Q378DRAFT_scaffold00012.12_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TACTTCCAGCAAGTCGGCGGCATCGAGTGCTACCCGGTCACCGGTGAGATCACCTATGGCCTGGAGCGCCTGGCCATGTACATCCAGGGCGTCGATTCGG TGTACGACCTGGTCTGGGCCGACGGCCCGTTCGGCAAGGTCACCTACGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTCGAGCA CGCCAACGTCGACAAGCTGTTCGAACTGTTCGACTTCTACGAAAGCGAAGCGAACCGCCTGATCAAGCTGGACCTGCCGCTGCCGACCTATGAAATGGTG TTGAAGGCTTCCCACACCTTCAACCTGCTGGACGCCCGCCGCGCCATCTCGGTGACCGAGCGCCAGCGTTACATCCTGCGCGTACGCACCCTGGCCCGGG ACGTGGCGCAAAGCTATCTGCAAGCCCGCGCACGCCTGGGCTTCCCGATGGCCACCCCTGAACTGCGTGACGAAGTGTTGGCGAAGCTGGAGGCTGCACA
DNA Sequence for Gene
>Q378_RS0113585
ATGAGTGCTCAAGATTTCCTGGTTGAACTGGGCACCGAAGAGCTGCCACCCAAGGCCCTTGCTACCCTCGGCGACGCCTTCCTGGCCGGTATCGAGAGGG GCCTGCAGGCCGCAGGCCTGAACTACACCGGCAAGCAGGTGTACGCCGCACCGCGTCGCCTGGCCGTGCTGATCCGCCAGCTCGACGTGCAGCAGCCGGA CCGCAGCATCAATATCGACGGCCCGCCCATGCAGGCTGCCTTCAAGGACGGCGAGCCAACCCAGGCCGCCCTGGGCTTTGCCAAGAAATGCGGCGTAGAG CTGTCGGAAATCGACCAGAGCGGCGCCAAGCTGCGCTTCTCCCAGCACATTCCGGGCAAGGCCACCGCGAGCCTGCTGCCGACCATCGTCGAAGATTCGC TCAACGACCTGCCGATCCCCAAGCGCATGCGCTGGGCGGCCAGCCGTGAAGAGTTCGTGCGCCCGACCCAGTGGCTGGTGATGCTGCTCGGCGACCAAGT GGTCGACTGCACCATCCTGTCGCAGCAGGCCGGCCGTGAATCCCGTGGCCACCGTTTCCACCACCCGGAAAACGTGGTCATCACCACCCCGGCCAACTAT GTCGAAGACCTGCGCAAAGCCTACGTGCTGGCCGACTTCGCCGAGCGCCGCGAGCTGATCAGCAAGCGTACTGCCGAACTTGCCCTACAGCAGGAAGGCA CTGCCATCGTGCCAGCGGCGCTGCTGGACGAAGTGACCGCGCTGGTCGAGTGGCCGGTGCCGCTGGTGTGCTCGTTCGAGGAGCGTTTCCTCGACGTGCC GCAGGAAGCCCTGATCACCACCATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGACAGCGAAGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCCAAC GTCGAGAGCCGTGACCCCAAGCAGATCGTGCAGGGTAACGAGAAGGTCGTGCGCCCACGCCTGACCGACGCCGAGTTCTTCTTCAAGCAAGACAAGAAGC AGCCGCTGGAAACCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCTCAGCTGGGCACCGTCTACGACAAGGCCGAGCGCGTTTCCAGGCTGGCTGC CTTCATCGCCCCGCTGATCGGCGGCGACGCCCAGCGCGCTGGCCGTGCAGGCCTGCTGTCGAAGTGCGACCTGGCCACCGAGATGGTCGGCGAGTTCCCT GAAATGCAGGGTGTTGCCGGTTACTACTACGCGCTCAACGATGGCGAGCCGCAAGACGTCGCCCTGGCCCTGAACGAGCAGTACATGCCGCGCGGTGCTG GCGCCGAGCTGCCGCAGACCCTTACCGGTGCGGCCGTGGCCATCGCCGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATCGGCATGCTGCCCACCGG CAGCAAGGACCCGTACGCCCTGCGCCGTGCCGCCCTGGGCGTGCTGCGCATCCTCATCGAGAAGCAGCTGGACCTGGACCTGACCACTGCGGTCGAGTTC GCGGTCAAGCAGTTTGGCGCCAAGGTCAAGGCCGCCGGCCTGTCCGAGCAGGTGCTGGAATTCGTCTTCGACCGCCTGCGCGCGCGCTACGAAGACGAAG GCATCGACGTCGCCACCTACCTGTCGGTACGCGCCCTGAAGCCGGGCTCGGCCCTGGACTTCGACCAGCGCGTGCAGGCCGTGCAGGCCTTCCGCAAGCT GCCGGAAGCCGAAGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGCGCCATCGCCGACCAGGTCGAGCCGAAGTACTTC GACAACGCCAACGAGTTCTCTCTGTACTCGGCCATCCAGCAGGCCGACCAGGCCGTGCAACCGATGGCTGCCGCACGCCAGTACAGCGAGTCGCTGGCGC GCCTGGCCGCCCTGCGTGACCCGGTCGATGCCTTCTTCGAGGCAGTGATGGTCAATGCCGAGGATGCCAAGGTACGTGCCAACCGTTATGCCCTGCTCAG CCGCCTGCGCGGCCTGTTCCTGGGCGTTGCCGACATTTCGCTGCTGGGGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCTTGAAACTGCTGATTCTCGATCGTGACGGGGTGATCAACCAGGACTCCGACGCCTATATCAAGTCGCTGGAGGAGTGGATCCCGATACCCGGCTCGG TCGAGGCCATCGCGCAGTTGAGCAAGGCGGGCTGGACGGTGGCCGTGGCCACCAACCAGTCCGGCATTGCCCGTGGCTACTACTCGCTGGCAACGCTCGA GGCCATGCATGCGCGCTTGCGTGCACTGGTGGCAGAGCAGGGCGGCGAGGTGGGCCACATCGTGTATTGCCCGCACGGGCCGGACGAAGGCTGCGCTTGC CGCAAGCCCAAGCCAGGCATGCTGCGGGCGATTGCCGAGCATTACCAGGCGGACCTTCGCGGCGTCTGGTTCATCGGCGACAGTTCAGGTGACCTGCAAG CCGCCTTGGCCGTCGATGCACAACCGGTGCTGGTGAAAACCGGCAAGGGTGAGCGGACCCTGCAAAAGGGCGTCCCTGAAACTACACTGATTTTCGACGA
Amino Acid Sequence
>glycyl-tRNA ligase subunit beta
MSAQDFLVELGTEELPPKALATLGDAFLAGIERGLQAAGLNYTGKQVYAAPRRLAVLIRQLDVQQPDRSINIDGPPMQAAFKDGEPTQAALGFAKKCGVE LSEIDQSGAKLRFSQHIPGKATASLLPTIVEDSLNDLPIPKRMRWAASREEFVRPTQWLVMLLGDQVVDCTILSQQAGRESRGHRFHHPENVVITTPANY VEDLRKAYVLADFAERRELISKRTAELALQQEGTAIVPAALLDEVTALVEWPVPLVCSFEERFLDVPQEALITTMQDNQKYFCLLDSEGKLLPRFITVAN VESRDPKQIVQGNEKVVRPRLTDAEFFFKQDKKQPLETFNERLKNVVFQAQLGTVYDKAERVSRLAAFIAPLIGGDAQRAGRAGLLSKCDLATEMVGEFP EMQGVAGYYYALNDGEPQDVALALNEQYMPRGAGAELPQTLTGAAVAIADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKQLDLDLTTAVEF AVKQFGAKVKAAGLSEQVLEFVFDRLRARYEDEGIDVATYLSVRALKPGSALDFDQRVQAVQAFRKLPEAEALAAVNKRVSNLLSKAEGAIADQVEPKYF DNANEFSLYSAIQQADQAVQPMAAARQYSESLARLAALRDPVDAFFEAVMVNAEDAKVRANRYALLSRLRGLFLGVADISLLG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site