Pseudomonas umsongensis UNC430CL58Col, N519_RS0119585
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00017.17_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCAAACCCATGCGTGCTCACTTCACCAAGATCCTGAACAAGTGGAAACAGGACTTGATGCAGGAAGTCGACCGTACCGTTGATCACATGAAAGACGAAG CGGCCAACTTCCCTGACCCGGCAGACCGTGCCAGCCAGGAAGAGGAATTCAGCCTCGAATTGCGCGCCCGCGACCGTGAGCGCAAGCTGATCAAGAAAAT CGACAAGACCCTGCAACTGATCGAAGACGAAGAATACGGTTGGTGCGAGTCCTGCGGCGTCGAAATCGGCGTCAAGCGACTGGAAGCCCGTCCTACCGCC GACATGTGCGTTGACTGCAAGACCCTGGCGGAAATCAAGGAAAAGCAAGTCGGCAAGTAATCTCGACTTGAACGAAAGACGGAGCGTGCGAACGCTCCGT TTTTGTTTCTGATATTTACTGATATTTGTTGCGACCTCAAAATCGCCGAGGGCTGCTTCAAGCCGAGCTCAAAACGATTGGACAGCCTAACCTCCCCTTT
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| DNA Sequence for Gene |
>N519_RS0119585
ATGACCGCCATCGCCTCTTCCCCCTACATCGGGCGCTTCGCCCCCACGCCCAGCGGGCACCTGCATTTCGGTTCGCTGGTTGCAGCGCTGGCCTCGTACC TCGACGCCCGTTCGGTCGGCGGGCGCTGGCTGGTGCGCATGGAGGATCTAGATCCGCCACGCGAGGAGCCCGGCGCTCAGGCGGCGATTCTCAAGGCGCT GGAAAGCTACGGTTTCGAGTGGGATGGCGAGATGGTCCGACAGAGTGACCGCCACGCGGCCTACGCCGAAGTCCTCAATCGCCTGTTCAGCCAGGGCCTG GCCTACGCATGCACCTGCTCGCGCAAGCAATTGGAGCCGTATCACGGCATCTATCCCGGGTTCTGCCGCAACGCGGGGCACGGCACTGAGAATGCGGCGA TCCGCGTGCGCGTACCGGAGCTGGAATACCACTTCATCGACCGGGTGCAGGGCGAATTCCGTCAACACCTGGGCCGCGAGGTGGGTGACTTCGTGATTCG TCGCCGTGACGGGCTCTACGCCTATCAATTGGCGGTGGTGCTAGACGATGCCTGGCAAGGCATCACTGATATCGTGCGCGGCGCCGACCTGCTGGACTCC ACGCCACGCCAGCTCTATCTGCAAGAACTGCTCGGCCTGCCGCAACCGCGCTACCTGCACATCCCGTTGATTACCCAGCCGGACGGCCACAAACTCGGTA AATCCTATCGCTCGCCGCCGCTGACCGAGGATCAGGCTACGCCGCTGTTGCTGCGCGCATTGCGGGCGCTGGGGCACACTCCCGTTATCGAACTCAATGA CGCCACGCCACGGGAAGTGCTGAATTGGGGCATTGCCCACTGGGATGCGTCGCTGATCCCGCGCACACTGACGTTGCCTGAAGCGCAACTGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCCACTTGCAGTGGCGCACCCATCCGTTACCATCGCCGCACGTTTTCGGGCACGCGCATAAGAGAGAGAGGCCGGGATGTACATCTATCGCTTGGTCCT GCTCCTGGTAGTGGGGATTTATCTGTTCTCCCCGGCCATCATGGATTGGTGGATCGACGCCACTGGCGCCTGGTATCGCCCTTATTTGCTCTGGCTGATT CTGATCGTCGTGACCTTCATCCTGCAGAGCCAAAAAGATGCCGATGAGCTTTAGCCTGACCCAGATGATCCTGATCAGCGCCGCGTACCTGGCGGTGCTG TTCGGTGTAGCCTGGATCAGTGAACGGGGCATGATCCCCCGGGCGATCATTCGCCATCCGCTGACCTACACCCTGTCGCTGGGCGTTTATGCCAGTGCCT GGGCGTTTTACGGCACGGTGGGCCTGGCTTATCAGTACGGCTACGGTTTTCTGTCCAGCTACCTTGGGGTTTCCGGGGCGTTTTTGCTGGCGCCGGTGCT
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| Amino Acid Sequence |
>glutamyl-Q tRNA(Asp) ligase
MTAIASSPYIGRFAPTPSGHLHFGSLVAALASYLDARSVGGRWLVRMEDLDPPREEPGAQAAILKALESYGFEWDGEMVRQSDRHAAYAEVLNRLFSQGL AYACTCSRKQLEPYHGIYPGFCRNAGHGTENAAIRVRVPELEYHFIDRVQGEFRQHLGREVGDFVIRRRDGLYAYQLAVVLDDAWQGITDIVRGADLLDS TPRQLYLQELLGLPQPRYLHIPLITQPDGHKLGKSYRSPPLTEDQATPLLLRALRALGHTPVIELNDATPREVLNWGIAHWDASLIPRTLTLPEAQLQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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