Pseudomonas umsongensis UNC430CL58Col, N519_RS0102500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGTCGATTCAGGGGCTAGGCTTAGTCTGAGGTGAGCGATCGCCGATCAGTACGCTCGATCTAAGGAATTGAATGAACAAGTTCATTGTCGTGATAGCAG TAATGACATTGGCAGGTTGTACCACTAGTGCCAAAACTCATGCGATACGCGGCGTCAGTGGCATAGAGGTCGATTGTTCGGGGTTGGGCTCGGGATGGGA GAGGTGTTACAAGCGAGCGGCCAAGGAGTGTAAGGGGGCAGGCTATAAAGTCATCGTAAGGTCCGATGAGGCCAAAGAGGAAGATGTATTCCCTTTCGGC TTCAATCCTGCAGGTTATCTGACGCGCACCATGCTCGTCATATGCAGGTGAGCGGATGAGTTCGTCAGCGTTCCGGTGCTCTGAAATCAGGCATCTCGCG GCCGGGGAGAATATGTCAAAGCTCAGGCTGTTCAAATTCATCAGAGCATGCTAAAACCTTTGAAGCGCTGATCTAGCTGCTTGAAAAAGAAGGGAAAAAT
DNA Sequence for Gene
>N519_RS0102500
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTACTCTCATCCAAGGATGTGGAGCTGGCCATCAAGACCATGCTTGAGCAAATGT CCCAATGTCTGGCCACTGGTGATCGAATCGAGATCCGTGGTTTTGGCAGCTTCTCACTGCACTATCGCGCACCGCGCGTAGGGCGCAATCCAAAAACAGG TCAGTCCGTCAGCCTTGACGGCAAGTTTGTTCCGCATTTCAAGCCAGGCAAAGAACTGCGCGATCGTGTGAACGAAGATGAGGAGGAAGGGCTTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CGGCTTCCGCACTTCAAGGAGTCGCTGATGCGTAACCTCAAGCGCGTACTCCTCGCTGTATTTGTCCTGTTGCTCGTTCTGGTGATCCTGGCGTTCGTTC TTGAGAACCAGCAAGGCGTGTCCCTGCTGTTCCTCGGTTGGGCGGGCCCGCAGTTGCCAGTATCGCTGATCATGGTAATTGCGCTGCTGATCGGCATGGT GATCGGGCCCATTCTGGGCTGGTTTCTGGGGCGTCCGTCCAGAGCCTCACGCAAGCGCCTTGTCTGAGTGCGACAAGCCCGCTGTAGGCGTGGAATTTGC TTCGCAGCTTGTCCATATCCGTTAGTAAAACCTTCATTAAGCTGTAAAATGCCGCGCTTGATCGATAGGGCATTTCCTGATTTGTTCAAACTGACTCAGT CAGAAGCTTCAGCTGACTTGATGGCTTTTGCATTCATGGATTAGGCAACGCTCGGTTGGCGGCCCCGTCAGTAACTCAAGGATATGGTTTCGCGTGAAAA
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEEGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site