Pseudomonas putida KT2440, PP_4045 (tsp10)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGCCTTGCTGGAGAGCCTCGACCTGCGTGGCCAAGCGCAGCATGAAGCGCTCTTGCGCTATCTCGAACAGTGGTATGCCAAGGCGCATGGCTGCTATTG GCACGATCGCCATGCCCGGGCACGGGGTGACCACTTGGGCTACTGGGCACTCGAAGCGGCGCTGGTAGCGTTTTTATGGTCTGTGCCAGGGGATGCTCTG GAGAGCGCCCCACATTTTTTTCCAAAGGCACTCATCGCAAGGGCGCATTACCGACGACTGGGCAAACAGTTCCGCGACCCGGAAACCGCCAGGCGCGAGG ACGCTCCTGGCTGGCCTTCTGGCACCCCTTGCCCATGGCCCGGTCATTACACCTGCGTCGAGCGCAGTGTGGGTGAACAGGTGTTCATGCACCAGACACC CTTCCCCAAGATCGATGGCCAGGTGGTTCACTGGCGGCTGTCGAGGACATTCTGATTGGCGCTGCCGGCATGAGTGCGTGGCGCTTTACATGATTCAGGA
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| DNA Sequence for Gene |
>PP_4045
|tsp10
GTGGCGACAATGCCTGCCATCGTTCTGCTTGGTCACCCTCACCATTGCCCATTGTGCGGCCCCACCAGCGTCAGCAGCGGCTCCAGCCTGTTCTTCGTCA ACGGCAGGGCGGCCGCCAGGGTTGGCGACAGGCTCGGCTGTGGGGCGGCGATCACCAGCGGCTCGGCGCTGATGATGGATGAAGGACAGCCGCTTGCTAG GGTAGGCGATGCTACCAGTCATGGCGGCGTCCTGGAAAATGGCGATAACAGTTGGTTGCTCGATTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGAAGTGGGAGCGGTTCAGCCCCCACAGGGAATGGGCAAGATCAGAGGCTGACGGTCTTGCCATCGGTGCGCGCTTGCGCCAACAGCAGGTTCAACTGG GCGACCTGCTGACGCAGCTGGTCACGTTCGTCTTTAAGTTTACGCAGCTCATCACGGCGCACGGAGACATAGAGGGTCTGGGGTGGGGTTGCTGGCATCA ATGTACCCATGAGCACACCTCGCGGTTTTGGCTGGTGACAAGTCAAAGCGTAGACGCTTCACGCGGGGCGCATTCTGAATTCTTTCACCGGGCTTGGGAA CTTTTTTGTTTATTGTGGTCTTGCCGTTCGTCGCTGAACCCTCGGGCGGCATGCTGGACTAATCTGAAAAGCTGGACTGTCGTCATCCATTTCGAAAAGG GAGCATTGGCTCATGCAACTGGGAATCATCGGGCTGGGCCGTATGGGCGGCAATATCGCAAGGCGCCTGATGCGCGCCGGTCACCGCACCGTGGTGCACG
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| Amino Acid Sequence |
>Tsp10
MATMPAIVLLGHPHHCPLCGPTSVSSGSSLFFVNGRAAARVGDRLGCGAAITSGSALMMDEGQPLARVGDATSHGGVLENGDNSWLLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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