Pseudomonas putida KT2440, PP_2616 (tssL3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCTGCCGCAGGAGTACCCCGCCTATCACCACACCGCACTGCGCACGTCTTTCAAACCGCTGGAAGATACCTTGCGCCGGTCTCTGAGCACCGTCTTG CGGCCACGCGCTGTTTCACTACCGCTGGAGAGCGAACAATTCGGCGTGATGACGACCACGCTGGAAGACCGCCGGCTGATCGACGAAGCCGACTTCATCC TCGCCGTGCGCGCCAGCATGCCACCACAGGCGTTGCGCCAGATGTTCATCCAGAAAGCCAAGATCACCTCACTTGAGTCACTGAATGACCTGGTGCCGCT GCAATTGCCGGGCATCCCTTTGCTGCCATTACCCGTGGCGCCCCGCGACCTGCCCTTCCATGCGGGTTTCAGCTACTTCGAGCTGGACCGACGTGACCCG GCCTGGGCGTGCATGAGCAAGGCGAATGGCTTCGGCATCCACATTGCGGGCGACTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGAGTGAGTGAC
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| DNA Sequence for Gene |
>PP_2616
|tssL3
ATGGGAAAAGACAACAATACGCCCACCGATGAAAACAACGCTGCAGTCAACGCGCTTGATTCAACCCTTCAACAGCCAGTACCCGCCCCCCGGGCTGCAG CAACCAATGGGCAAGCATCCACGGACAAACCTGAGCCAGAGCCCGTTTCCGAAGGCTACCCCGCTGACCCGGAATTTCAGCTGCGGGGCGGCTTCGCCAA CCTGATGCTGGATGCCGCATCACCGTTGTTCGGCTTGGTCATACGCCTGCGTACGCTGGACGAGCTGCCGAACATCCAGGACGTGCACCAGCAAGTACGC AGCCAGATCGACAACATTCAGGAAGAAATGCGCCAGCACGGTTACGAGCCGGCTCAGTTGCTGGCGTACTCCTACGGTCTGTGCCTGTTCATAGACGAGG CCGTTATGGAGCGGCCCTGGGGCAAGAGCAGCTGCTGGAGCCAGGAGCCGCTGCTCAGCATCTTCCACGACGAGACCTGGGGTGGGGAAAAAATCTTCAC CGTGATTACCCGCCTGATGCAGGAGCCCAAGCGTTATCAGGACGTACTGGAGTTCATGTACTTCGCCCTGTGCCTTGGGCTGAAGGGCAAGTACGCGCTC GCGCCGAAAGGCGAAGAAACACTCAACGCATTGATTCACCAACTGCACGGGATCATCCGCGAACTGCGCGGCCCTACCCCCGAAGAAGTCTGCGACCCCT ACACCAATGTGGCCCCACGCAACTTCCGCATGAGCCGGCAATGGCCCTGGTGGAGCCCCTTGGTGATTTCCGCCATCGCCATGGCGGTGGCCTACGGGAT CTACAGCTACCGCCTGCACCTGATCACAACCGAGGTGCTGGAGTCGCTGAACGGCATTTTGCAGCAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCAACCGTGTCACAGCACCACTGAGTTCAACGAATTCGCGAGGTTTTTGCCTCGCTGACAAGCCCATCGTTTCCGATGGCCACGCCACCTGTGGTGCGCG TGCTTTACCCACATGGACGCAGGAGTAACTGCCATGCCAACACCCGCTTACATCAAGATCGTAGGCCAGACCCAAGGCAACATCACCGCTGGCGCCTTCA CCGCTGACTCCGTCGGCAACGTGTTCCAACAAGGCCATGAAGATCAGATTCTGGTTCAGGAAATCAAGCATGAGGTGACTACGCCCACTGACCCCCAGAG CGGTCAACCGAGTGGCCAGCGCGTGCATAAGCCTTTCATATTCACCAGTTCACTGAACAAAGCTACCCCCCTGATGTATCAGGCACTTGCCAACGGCGAA ATGCTGCCAACGGTCGAGGTCAGCTGGTATCGCACCTCGTCGGAAGGCAAACAAGAGCATTTTTTCACCACCACGCTCGAAGACGCCACCATCGTCAGCA
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| Amino Acid Sequence |
>TssL3
MGKDNNTPTDENNAAVNALDSTLQQPVPAPRAAATNGQASTDKPEPEPVSEGYPADPEFQLRGGFANLMLDAASPLFGLVIRLRTLDELPNIQDVHQQVR SQIDNIQEEMRQHGYEPAQLLAYSYGLCLFIDEAVMERPWGKSSCWSQEPLLSIFHDETWGGEKIFTVITRLMQEPKRYQDVLEFMYFALCLGLKGKYAL APKGEETLNALIHQLHGIIRELRGPTPEEVCDPYTNVAPRNFRMSRQWPWWSPLVISAIAMAVAYGIYSYRLHLITTEVLESLNGILQQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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