Pseudomonas viridiflava LMCA8, RT94_RS01365

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas viridiflava strain LMCA8 contig_5, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCGCACTGGACCCGCAGACCACTGCGTCGGTCCTGCAACTGCTGGCTGAGATCAATCGTGAGCTGAAGCTGACCATCGTGCTGATTACCCACGAGATGG ACGTGATTCGTCGCGTCTGCGATCAGGTCGCCGTCATGGACGCCGGCGTGATCGTCGAGCAGGGCAAGGTGGCCGATGTGTTTCTGCATCCGCAGCACCC GACCACCAAGCGCTTCGTGCAGGAAGACGAACAGATCGATGAGAACGAACAACGCGACGACTTCGCCCATGTCGAAGGCCGTATCGTGCGCCTGACCTTT CAGGGCGAGGCGACCTACGCGCCGCTGCTGGGCACCGTGGCGCGGGAAACCGGCGTCGATTACAGCATCCTGGCCGGTCGCATCGACCGCATCAAGGACA CACCTTACGGGCAACTGACGCTGGCCATTACCGGCGGCGACATGGACGCTGCATTCGCGCGCTTCACCGCCGCTGATGTCCACATGGAGGTGCTGCGCTG
DNA Sequence for Gene
>RT94_RS01365
ATGGACGCCTTTCTGAACCTGTTCTCCAACGTCGACTGGTATGAAATCTGGGTCGCCACCGGCGATACGCTGATCATGCTCAGTGTGTCGCTGGGCTTCA CTATCCTGCTCGGCCTGCCGCTGGGCGTGCTGATGTTCCTGACCTCGCCACGCCAACTGCTGGAACACAAGCAGCTGTACGCCACGGTCGGGCTGATCGT GAACATGCTGCGTGCCTTGCCGTTCATTATTCTGCTGATCGTCATGATGCCGCTGACCGAGATCATCACCGGCACATCGCTGGGCATTCTGGGCACGCTG CCGCCGCTGATTGCCGGTGCCACGCCGTTCTTTGCGCGTCTGGTGGAAACCGCCCTGCGTGAAGTCGACCGCGGCATCATCGAAGCCACACAGGCCATGG GTGCCACCACCCGGCAGATCATTCTCAAGGCGCTGCTGCCCGAGGCGCGGCCTGGCATCTTCGCAGCGATTACCGTCACCGCCATTGCGCTGGTGTCCTT CACCGCCATGGCAGGTGCTGTCGGTGCAGGCGGGCTGGGCGATCTGGCCATTCGTTATGGATACCAACGTTTTCAGAACGATGTGATGTTCGTGACGGTC GTATTGTTGCTGGTGCTGGTGCAGATTCTGCAAACCGTCGGCGACAGACTGGTCGCGCACTTCACACACCGTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGAATCAGTTGGCATCGGCCTGCCGCAGGCGGGCCTCAAAGGAGTTGTTGCATGAAAAAGCTATTGGCCGTATTTGCCGCCGTAACCGCACTGTCCGCA CAGGCCAACGAAACCCTGACGGTCGCAGCCTCGGCCGTGCCCCACGCCGAGATCCTGGAGTTCGTCAAACCGACCCTGGCCAAAGAAGGCGTGGACCTGA ACATCAAGGTCTTCAACGACTATATCCAGCCGAACGTGCAGGTGTCGCAGAAGCGCATGGACGCCAACTTCTTCCAGCACCAGCCGTATCTGGATGAGTT CAACAAGGGCAAGGGCACCGATCTGGTCGCCGTGACCAAGGTTCACGTCGAGCCCTTCGGTGCCTACTCGGACAAATTCAAGAAGCTGGACGAGCTGCCA AGCGGTGCCAACGTCGCGCTGCCCAACGATGCCACCAACGAAGGTCGTGCGCTGTTGCTGCTGGCCAAGGCCGGTCTGATCACCCTGAAGGACCCGACCA
Amino Acid Sequence
>D-methionine ABC transporter permease
MDAFLNLFSNVDWYEIWVATGDTLIMLSVSLGFTILLGLPLGVLMFLTSPRQLLEHKQLYATVGLIVNMLRALPFIILLIVMMPLTEIITGTSLGILGTL PPLIAGATPFFARLVETALREVDRGIIEATQAMGATTRQIILKALLPEARPGIFAAITVTAIALVSFTAMAGAVGAGGLGDLAIRYGYQRFQNDVMFVTV VLLLVLVQILQTVGDRLVAHFTHR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site