Pseudomonas tuomuerensis JCM 14085, PT85_RS03125
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas tuomuerensis strain JCM 14085 PT85_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGGGGCTCCAAGCGTACCGGTCCGGACCTGGCCCGCGTCGGCGGTCGTTACTCCGACGACTGGCACCGTGCCCACCTGTACAACCCGCGCAACGTCGTGC CCGAGTCGATCATGCCCGCCTACCCCTGGCTGGTAGAGAACACCCTGGACGGCAAGGACACCGCCAAGAAGCTGCAGGCGCTGCGTACCCTCGGCGTGCC CTATACCGCCGACGACATCGCCACCGCACGCGACGCCGTCAAGGGCAAGACCGAGATGGACGCCGTGGTCGCCTACCTGCAAGTGCTTGGCACCTCGCTC ACCAACAAACGGTAACGGTGCATGGAAATCGGGCTAATTCGCGGCTTGGGCACCCTGGTGGTCTTCGTCGCCTTCATCGGCGTGGTCCTCTGGGCCTACA ACAGCAAGCGTCGCGGCAGCTTCGACGAAGCCGCGCTGCTGCCCTTCGCCGATGACCCGCAAGGCCTGCACAACCAGCAAGTCTCTAGGAGTAACCAAGA
|
|
| DNA Sequence for Gene |
>PT85_RS03125
ATGACTTCTTTCTGGAGCTGGTATATCACCCTGCTCACCCTCGGCTCCCTAGTGGCGCTGCTGTGGCTGATTTTTGCGACACGCAAAAGTGAACAGTCCA AGGGCATTACTGATCAAACGATGGGCCATTCCTTCGATGGCATCGAGGAATACGACAACCCGCTGCCGCGCTGGTGGTTCCTGCTGTTCGTGGGCACCAT CGTCTTCGGCGCCGTTTACCTGGCCCTCTATCCGGGCCTGGGCAACTGGAAGGGCATCCTGCCCGGCTATGAAAATGGCTGGACCAGCGTTGGCCAGTGG GAACGCGAAATGCAGCGTGCCGACCAGCAGTACGGGCCGATCTTCGCCAAGTATGCGGCCATGCCGCTGGAGGAAGTCGCTCAGGACGAGCAGGCTCTGA AAATGGGCAGCCGCATGTTCGCCACCTACTGCTCCATCTGCCACGGCTCCGATGCCAAGGGCTCGATGGGCTTCCCCAACCTGGCCGACAGCGACTGGCG CTGGGGCGGCGATGCCGAGACCATCAAGGCCTCCATCCTGCACGGCCGCACCGGCGTGATGCCGGCCTGGGGCGCGGTGATCGGCGAAGATGGCGTGAAG AACGTGGCCGCCTATGTGCGCCAGGAACTGGCTGGCCTGAAGCTGCCGGAAGGCACCCAGGTTGACCTGGAAGCCGGCAAGCAGGCGTTCGCCACCACCT GCGTGGCTTGCCACGGTCCGGAAGGCAAGGGTATGGCCATGCTCGGCGCACCCGACCTGACCCACCCGGCCGGCTGGATCTATGGCACCAGCCTGGCCCA GCTGCAGCAGACCATCCGCCATGGTCGTACCGGCGTCATGCCGGCCCAGGAATCCTACCTGGGCAACGACAAGGTGCACCTGCTGGCGGCCTACGTGTAC AGCCTGTCCAAGCAAGCGCAAGTGGCCAGCAAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCGCCGCCACCGACCTTGATCTGTAACAAACATTCGGCCGCCTTCGTGCGGCCGAATGTCGCACCGCACGCCTGCCCTTCCCCGCCCCCCGCTCCATTCG GTTACCCTTTTCACGCATCGCTTGGCCGTGCCTAAGAAGGCAGCCGAGGTCTTCCAGCTTTCCGCCGTTCGTCGCGCACGCTTCCGACACTCCGACCATC GCTGTAAGCCCTTGATTTTCCGGCCTCTGCGAGCCCCGCCAAAAGGGTGGCGCGTTTGCATTGACCTTCCGGTTTCTCCATACTGCCGCCGTTTTTTGCC TTGTGCGCCTTCTAACCGTGGAACCCCTACAAATGAGTACAGCAATCCAAAGTGCTTATAACTATAAGGTGGTCCGCCAGTTCGCCATCATGACGGTGGT CTGGGGGGTCATAGGAATGGGTCTAGGTGTGTTCATCGCCGCGCAACTGGTGTGGCCCGAACTCAACCTCGACCTTCCCTGGACGAGTTTCGGCCGCCTG
|
|
| Amino Acid Sequence |
>cytochrome Cbb3
MTSFWSWYITLLTLGSLVALLWLIFATRKSEQSKGITDQTMGHSFDGIEEYDNPLPRWWFLLFVGTIVFGAVYLALYPGLGNWKGILPGYENGWTSVGQW EREMQRADQQYGPIFAKYAAMPLEEVAQDEQALKMGSRMFATYCSICHGSDAKGSMGFPNLADSDWRWGGDAETIKASILHGRTGVMPAWGAVIGEDGVK NVAAYVRQELAGLKLPEGTQVDLEAGKQAFATTCVACHGPEGKGMAMLGAPDLTHPAGWIYGTSLAQLQQTIRHGRTGVMPAQESYLGNDKVHLLAAYVY SLSKQAQVASK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|