Pseudomonas sp. StFLB209, PSCI_RS23065
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. StFLB209 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TTTGTCGAAGTTCCTTACAATCAAAGTTTTGGTTGTCGTATTGACAGTTTTTCTGATAAACGGTTGCAGCCTTTTTGCTCAACGCGTTCAATTGCACAGC GTGCGCATTGACGTCGAGCCAAGAGCCAACAACGACACCCCACTGGCGCTGGACTTTGTAGCTGCCAGTGATGCCGTGATGCTCGACCGCCTCAAAGCCA CCACCGCCAGCCAGTGGTTCGAACAACGCGAGCAGTTGCAACGCGATTATCCAGGCGCCGTGCACATCTGGAGCCTGGAGGTAGTACCCGGTCAATTGCT CAACCTGACCGACAACCCGCTGCACCGCCGCAAGGCGCAAGGCTTGCTGATTTTTGCCCGCTACAGCACGCCAGGCCCGCATCGCCTGCTGCTGCAGGCA CAAGACAGCATCTGGCTCAAAGTGGGTTCGCGCGAGATGCGCCTGCTTGATGCCAAGGGGCAATGAACGCAGGTTTCTCAGGATGGCTCAGGAGTCGAGA
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| DNA Sequence for Gene |
>PSCI_RS23065
ATGCGCAGTACCCCAGACGCGATTTGCTGGTACGAAGGCATGCACTTGCTGCCCCAGCATTTCCAGTTGCAAGACCTGCGAGCGCAAAGCCTGAGCGCCC GCCTGACAGAACATTCCCGCCCCTGGTACTGGGGCGTACAGCAATTGCAGATCGATCAACTGGCACTGAGCAACGGAACGCTGCGCATCAGCGCCCTCAA TGCGGTAATGCCCGATGGCCTGGTGGTGGAATTCAACCCCGAACGCGACAGGGACTTTGTCCCGCAACTGACCATCACCCCCAAGGATTTTGAAGACCAG CGCAGCCTGATCGTCTACCTGGCGGTCGATCCGTTGTGGCGCTCCGGGCAACTGGTGCCGCTCAATGGCCGACTGCGCTCAGACAATGCTCAGCCGGTGC TGGACCTGAGCAGCGGCGAACACCCCGAGACCGTCAGCGTGTGGCGCCCGAACCTGCGCCTGGTGCTGGCGGCCGGACGCTCCGACTCGGTATGCCTGCC CCTGCTGCGCCTGGGCTGCGAAGACAACGTCATCAGCCAGCTGCCCTACACCCCGCCCACCCCGCTGCTCACGGCCCAGTCGCCGATTGGCTCAAGAATC GCCAGCCTGTGTGAGCAGGTGCGCCAGAAAGGCGAAGCACTGACCCGACGCTGGATCCAGTTGCAGGAGGCCGGCAAAGGCAACGACAGCGCTGAATTAC ACATGTACAAACGCGCCGACTTGCGCATGCAGATCAACGCGTTGTGGTCGCGTCTGCCAGAGCTGCAAGCCAACCTGGAAACCGGCGTCGCCACGCCAGT TTCACTGTACTTGCAACTGACCGGCATGGCCGGAGCAATCGCCAGCCTGCAACCGGAGCTGGGCGTGCGCAGCTTCGCGGCATTGAATTTCGAAGACCTG CAGGCCGGCTTCGATCCCGTGCTGGACTGGCTCGAGTCACGCCTGAGCAGCATCAGCGCCGGTTACCAGCGACGCAGTTTCGAGTTGCGCGAGCGATTGT TCCTGATCGGCCTGCAAGACACCAGAAGCACCCAGCAAGCACTGATCATCGGCCTGCGCATGCCCTCAGGGTCCACGCCACAAGCCGCACGCGGCTGGCT GGAACAAGCGATCATCAGCTCTCGCCCGCATCTGCCGGCCCTCAGCCGTCAGCGCATGCGCGGCCTCGAGTTTGGCAACCTTGAGCGCGATGAGTTGATT GCCTGCGGTGCCGGCGAAGACATTCGCCTGTTCAAAATCCACGCCAGCGGCCAATGGTTCACCCCCGACAGCGAGCTGTGCCTGTACGTACCACCTGGCA GCGGCTGGGTAGAGCCTGCCGAAATCGTCATGTTCGACATGAGCAGACCGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCCCTCAGGGATTGATCGCACATGTTTGATAACGACCCATCGCAGTCCGGCGCGAACTTCGAGAGCACGCCGCTTTCCTCGGCGCTCGGCCGCGCCTGG CTTGAATGGCTGAGCTTCTGGCAAACGCGTGCCGACACCCTCGCAGCACAGGATCAGACCGCTCAGGTGGCTGAACAAGTCAGCCTGATTGCCCGGCGTC TGTGGCGTAGCGCCTATGCAGCGGTAGGTGAGGCGCAGGGCGATCAGGCCAAGGCAACACTGTTCGCGTTTGTCGCTGTGGTCGACGAGTTTCTGCTGTT TACTTCGTGGGCAGGCCAGGCAGCCTGGGTCGAGCAACCGATGGAAAGCAGGCTGTTCAAGACGCGCATGGCCGGTGATCGGCTGCCACTGGAAATCAAA CGGGTACTGGACAGTCGCGATCCTGCCCTGCGTGATCTGGCCAATGTCTACCTGCTGTGCCTGACGCTGGGCTTTCAGGGCCGCTTGCGCAACGGCAACG
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| Amino Acid Sequence |
>hypothetical protein
MRSTPDAICWYEGMHLLPQHFQLQDLRAQSLSARLTEHSRPWYWGVQQLQIDQLALSNGTLRISALNAVMPDGLVVEFNPERDRDFVPQLTITPKDFEDQ RSLIVYLAVDPLWRSGQLVPLNGRLRSDNAQPVLDLSSGEHPETVSVWRPNLRLVLAAGRSDSVCLPLLRLGCEDNVISQLPYTPPTPLLTAQSPIGSRI ASLCEQVRQKGEALTRRWIQLQEAGKGNDSAELHMYKRADLRMQINALWSRLPELQANLETGVATPVSLYLQLTGMAGAIASLQPELGVRSFAALNFEDL QAGFDPVLDWLESRLSSISAGYQRRSFELRERLFLIGLQDTRSTQQALIIGLRMPSGSTPQAARGWLEQAIISSRPHLPALSRQRMRGLEFGNLERDELI ACGAGEDIRLFKIHASGQWFTPDSELCLYVPPGSGWVEPAEIVMFDMSRPD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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