Pseudomonas weihenstephanensis DSM 29166, TU86_RS20205
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. DSM 29166 11_147287_36.6562, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCCAGGCGCGAACACAGGCATTGCACGGCCATGCCCGCGAGGCTGGCCAGCAACACCACGAACAACAGGTTATAGCCATAACGCGAACCGGCTTCGAT GGCGGTGGCCCAGTTGCCGGGGTCCATGTAACCGATGCTGATCAGCAAGCCGGGGCCAGCAAAACGCAGGGCGCGTTTCCAGAAGGGGGCGCGGGCGTCC ACCGGCACGCTGCCACTGACTTCAGGCGGGCAGAACGGCGCTGTGGCGATTTTCGGCAGACTGAATTTCAAACGCTGGCTCCGGGTATCCAGGGGGGAGG GTTTGGCCAGGCGCACCGGCATGAGAATGGAGCGAGGTTACACCTGTGTCGGGCTTTTTGCCGCTGATCAGGTTGATACACCGGCTCTATTTCCGGCTTT TGCACGGGTTCTGGCCCACCGGTCAGTCCTGTGCTGGAGCCAAGCGGGGTCGGCCTGTTACCATTCGCCCCTTTGTTTCATCTCCACTTCGAGACCGCCC
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| DNA Sequence for Gene |
>TU86_RS20205
ATGACCACCGTTCGCACGCGCATCGCGCCATCGCCTACCGGCGACCCTCACGTAGGCACCGCTTACATCGCTTTGTTCAACTACTGCTTCGCCAAGCAGC ATGGCGGCGAGTTCATCCTGCGGATCGAAGACACTGACCAACTGCGTTCGACCCGTGAGTCTGAGCAGCAGATCTACGATGCCTTGCGCTGGTTGGGCAT CACCTGGAGCGAAGGCCCGGATGTCGGTGGCCCGCACGGTCCGTATCGTCAAAGCGAACGCAGCGACATTTACAAGCAGTACACCCAGCAACTGGTCGAC ATGGGGTATGCGTTCCCGTGCTTCTGTACTGGCGAAGAACTCGACCAGATGCGCGCCGAGCAAATGGCCAAGGGTGAAACCCCGCGCTACGACGGCCGCG CGCTGTTGCTGTCCAAAGAAGAAGTGGCGCAGCGCCTGGCCGCTGGCGAACCGCACGTGATCCGCATGAAAGTACCGAGCGAAGGTGTGTGCGTGGTGCC GGACCTGCTGCGTGGCGACGTCGAGATCCCGTGGGATCGTATGGACATGCAAGTGCTGATGAAGACCGACGGCTTGCCGACGTACTTCCTGGCCAACGTG GTCGATGACCACTTGATGGGCATCACCCACGTACTGCGTGGCGAAGAATGGCTGCCGTCAGCGCCGAAACTGATTCTGCTTTACGAATACTTTGGTTGGG AGCAGCCGCAGCTGTGCTACATGCCGCTGCTGCGTAACCCGGACAAGAGCAAGCTGTCCAAGCGTAAAAACCCGACATCGGTGACGTTCTACGAGCGCAT GGGCTTCATGCCTGAAGCGATGCTCAACTACTTGGGGCGCATGGGTTGGTCGATGCCGGATGAGCGCGAGAAGTTCTCGCTGCAAGAAATGGTCGACAAC TTTGATCTGTCCCGTGTATCGCTGGGCGGGCCGATCTTTGACGTTGAGAAACTGTCCTGGCTCAATGGCCAGTGGCTGCGCGACCTGCCACTCGAAGAAT TCGCTAGCCGTGTGCAGCAATGGGCGTTGAACCCTGAGTACATGATGAAAATCGCGCCGCTGGTTCAGGGCCGGGTTGAAACTTTCAGCCAGATCGCACC GTTGGCCGAGTTCTTCTTCTCGGGCGGCGTGCAGCTGGATGCCAAGCTGTTTGAGCACAAGAAGTTGTCCGGCGATCAAGTGCGTCAGCTGATGCAACTG ATTCTATGGAAGCTTGAAAGCCTGCGTCAGTGGGAAAAAGAGGCGATCACCGGCTGCATTCAAACAGTGGTCGAGTCCCTTGAGTTGAAGCTGCGCGATG CGATGCCGCTGATGTTTGCCTCGATCACCGGCCAAGCCAGCTCGGTGTCGGTGCTCGATGCAATGGAAATTCTGGGGCCGGACCTGACCCGTTTCCGTCT GCGTCAGGCGCTGGACTTGCTGGGCGGCGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAACTGTTCAACGCAATCGGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCAGAATGTAAGGCGTGTAGCCGCTGCCGAAGGCGGCGTCTGGCGGTAGTTGCTACGCGCTTGTACTGAAGGTTTGGCCTGTATTTACGGGCCGGGAAGG GTAAGTGGTTGTTCTCTCGACCATTTTTTTTAAAAAACTTTGAAAATAAGTTTGACAGCCTCCCGATCCAGTCTTAATATGCGCCCCGTCCACACAGCAA CAAGCAACACTGACTGTTTGGGGCTATAGCTCAGCTGGGAGAGCGCCTGCATGGCATGCAGGAGGTCAACGGTTCGATCCCGTTTAGCTCCACCAAATTT ACAGTTCACTGCCTGGCCACACCGGCATTGAATCGATCAGCACTCAGCGCTGATCAGTTAGAAGGTTTGTGTCCCCTTCGTCTAGTGGCCTAGGACACCG CCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCCTAGGGGACGCCAGTTTTACAGAAGCAGCACTTCGGTGTTGCTCCGCCGCCAGGCGATAAATCGGGG
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| Amino Acid Sequence |
>glutamyl-tRNA synthetase
MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIYDALRWLGITWSEGPDVGGPHGPYRQSERSDIYKQYTQQLVD MGYAFPCFCTGEELDQMRAEQMAKGETPRYDGRALLLSKEEVAQRLAAGEPHVIRMKVPSEGVCVVPDLLRGDVEIPWDRMDMQVLMKTDGLPTYFLANV VDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN FDLSRVSLGGPIFDVEKLSWLNGQWLRDLPLEEFASRVQQWALNPEYMMKIAPLVQGRVETFSQIAPLAEFFFSGGVQLDAKLFEHKKLSGDQVRQLMQL ILWKLESLRQWEKEAITGCIQTVVESLELKLRDAMPLMFASITGQASSVSVLDAMEILGPDLTRFRLRQALDLLGGVSKKENKEWEKLFNAIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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