Pseudomonas sp. DSM 28140, TU87_RS10630

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. DSM 28140 4_427964_31.8422, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AAAAAGCCGGCGATAATGCGGCCAAGGTCAAATTGACCCTGCCGGACGGCAGCGAGTACGCACAAGAAGGTCGCCTGGAATTCAGCGAAGTGTCGGTCGA CGAAACCACCGGTTCCGTGACGCTACGTGCACTGTTCCCCAACCCCGACGAGATTTTGTTGCCAGGCATGTTTGTGCACGCGCAACTGGAAGCGGGTATC GACAGCCACGCGATTTTGGCACCTCAAGTGGGCGTGACGCATAACCTCAAAGGCCAGCCGACAGCAATGGTTGTAGGGCCGGACAACAAGGTCGAACTGC GCGTACTGCAAGCATCCCGTACCGTGGGCAGCGACTGGCTGGTCGAGAAAGGTTTGAACCCTGGCGATCGCCTGATCACCGACGGCCTGCAATTCGTCAA GCCAGGTGTTGAAGTCAAGATCATGGAAAAACCACAAGGCGCAACCCCGGCAGCTGCCCCGGCAACAGAACAAGCTGCAGGCAGTAAAGGGGAGTAAACC
DNA Sequence for Gene
>TU87_RS10630
ATGTCGAAATTTTTTATCGACCGTCCGATTTTCGCTTGGGTAATCGCCCTGGTGATCATGCTGGTCGGGGCTTTATCGATCCTCAAACTTCCGATCAACC AATACCCGAGCATCGCACCGCCGGCTATCTCGATCTCCGTGACCTACCCGGGCGCTTCGGCGCAAACCGTGCAGGACACCGTGGTCCAGGTGATCGAGCA GCAGCTCAACGGTATTGACCACCTGCGTTATGTATCGTCTGAAAGTAACTCCGACGGCAGCATGACCATCACCGCCACGTTCGAGCAAGGCACCGACCCC GACACCGCTCAGGTGCAGGTGCAGAACAAGCTCAACCTGGCGACCCCACTGCTGCCTCAAGAGGTTCAGCAGCAAGGTATCCGCGTGACCAAGGCAGTGA AAAACTTCCTGATGGTTATCGGTGTGGTGTCTGAAGACGGCAGCATGAACAAAGACGACTTGTCGAACTACATCGTCTCTAACATGCAGGACCCGATCTC CCGTACCGAAGGTGTGGGCGACTTCCAGGTGTTCGGCGCCCAGTACGCCATGCGTATCTGGCTCGATCCAGCCAAGCTGAACAAGTACAACCTGACCCCG GTGGACGTTAAGTCCGCTATCAGCTCACAGAACGTACAGGTGTCCTCCGGGCAACTGGGCGGCCTGCCAGCTGTAAAAGGTCAAGAGCTGAACGCAACCA TCATCGGCAAAACGCGCCTGCAAACTGCTGAAGAGTTCAAAAAGATACTGCTTAAAGTCAACACTGACGGCTCTCAGGTACGTCTGCACGACGTCGCCGA AGTCGCTTTGGGCGGTGAGAACTACAGCATCAGCGCGCAGTACAACGGCAAACCGTCTTCGGGTCTGGCGATCAAACTGGCCACCAATGCCAACGCACTG GACACGGCCAAGGCGCTGCACCAAACCATCAATGATCTGGCTCCGTTCTTCCCGCCCGGCATGAAAGTGGTTTACCCATACGACACCACGCCAGTGGTAT CGGCCTCGATCAAGGGCGTTGTTGAAACCCTGGTTGAAGCCGTCGCTCTGGTGTTCCTGGTGATGTTCCTGTTCCTGCAAAACTTCCGCGCCACCATCAT CACCACCATGACGGTGCCAGTGGTATTGCTGGGTACATTCGGCATTCTCGCTGCAGCCGGTTTCAGCATTAACACCCTGACCATGTTCGGCATGGTACTG GCCATCGGTTTGCTGGTGGACGACGCCATCGTTGTGGTGGAAAACGTCGAACGGGTCATGAGCGAAGAAGGATTGTCACCCAAAGAAGCCACCAAGAAAT CCATGGAGCAAATCCAGGGAGCTCTGGTGGGTATTGCCTTGGTACTGTCGGCCGTATTACTGCCAATGGCGTTCTTTAGCGGCTCAACCGGTGTGATCTA CAAACAGTTCTCGATCACTATTGTTTCGGCGATGGCGCTTTCGGTACTGGTTGCCCTGATCTTCACCCCGGCCTTGTGCGCCACCATGCTCAAGCCCGTC AAAAAAGGGGATCACGGCGAAAACAAACGCGGTTTCTTCGGCTGGTTCAACCGCACTTTCGACAGTGGCGTGAAGCGCTACGAGAAAGGTGTCGGCAACA TCCTGCGCCACAAGGCTCCGTATCTGCTGGCATACGTGCTGATCGTCGTCGGCATGGTCTTCCTGTTTACACGCATTCCTACCTCGTTCCTGCCAGAAGA AGACCAGGGCGTACTCTTCGCTCAGGTCCAAACTCCAGCCGGTACGACAGCAGAACGCACACAGGTAGTAATTGACCGCATGCGCGAATACTTGCTCGCC GATGAATCGGCGGCAGTGTCTTCGGTGTTTACCGTGAACGGCTTTAACTTCGCCGGTCGCGGCCAAAGCTCCGGTCTGGCGTTCATCATGCTCAAGCCTT GGGGCGAGCGTGATGCCGACAACAGCGTGTTTGCACTGGCAGCCCGTGCTCAGGCGCACTTCTCCACCTTCCGCGATGCAATGGTGTTTGCCTTTGCCCC GCCAGCAGTGATGGAGCTGGGTAACGCCACCGGTTTTGACGTGTACCTGCAAGACCGCGCCGGTATTGGCCACGAAAAGCTGATGCAAGCTCGCAACCAG TTCCTGGGCATGGCATCGCAAAGCAAGATCCTGGCAGGCGTGCGACCAAACGGCCTGAACGATGAACCGCAATACCAACTGGAAATTGATGACGAAGCGG CTCGCGCCCTGGGCGTTAGCCTGACAGACATCAATAACACCCTGTCTATCGGTCTGGGTGCCAGCTACGTCAACGACTTCATCGACCGTGGTCGTGTGAA AAAGGTTTACCTGCAAGGCGAAGCTGACTCGCGGATGAACCCCGAAGACCTGAAGAAGTGGTACGTGCGTAACGACGAAGGAACCATGGTGCCGTTCTCG GCGTTCGCCAAAGGCAAGTGGACCTACGGTGCACCGAAGCTGTCGCGCTACAACGGCGTAGAAGCTATGGAAATCCTCGGCGCCCCGGCACCCGGCTACA GCAGTGGTGAAGCCATGGCTGAAGTTGAAGCCCTGGCCAAGAAACTGCCGGCAGGTGTAGGTATTTCCTGGACTGGCCTGTCATACGAGGAGCGTCTGTC GGGTTCGCAAGCACCTGCTTTGTACGCAATTTCCTTGCTGATGGTGTTCCTGTGTCTCGCAGCGCTGTATGAAAGCTGGTCAATCCCGATTGCAGTGATG TTGGTTGTACCGCTGGGGATTATCGGCGCCCTGCTGGCCACCAGCCTGCGCGGACTGTCCAACGACGTGTACTTCCAGGTGGGCTTGCTCACGACCATCG GTCTGGCATCGAAAAACGCCATTCTGATCGTCGAGTTCGCCAAAGAGCTGCATGAACAAGGGCGAACCCTGACCGAAGCCGCCATCGAGGCGTGCCGTAT GCGTCTGCGTCCGATCATCATGACGTCGCTGGCGTTCGTATTGGGTGTGATTCCGCTGGCCATCTCCTCGGGTGCCGGTTCAGGCAGCCAGCACGCCATT GGTACCGGTGTAATCGGCGGTATGATCACCGCCACGGTTCTGGCCGTGTTCTGGGTGCCGCTGTTCTTCGTTGCCGTGTCGTCCTTTGGCAGCAAGGACA AAGAAGAACAGAAGAAAGTAGATCTGACTAAAACTCCAAATCAAGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCGCTTCTCGCAGTAGCGGTCGCAGCGTTTACGCTGGGCGGCTGCTCGCTGATCCCTGACTACCAGCGCCCTGAAGCGCCGGTAGCAGCGCAGTA CCCGCAAGGCCCGGCCTACAAGCCAAACGAAGCGCCGAATCAAACGGCTGCCGAGCAAGGCTGGCGTCAGTTTTTTCATGACCCGGCCCTGCAACAGTTG ATTCAGACGGCACTGGTCAACAACCGTGACCTTCGGGTCGCGGCCTTGAACATTGATGCATATGCCGCGCAGTACCGTATTCAGCGTGCGGACCTGTTCC CGGCAGTAAACGCGAATGCCAGCGGTAGCCGTCAACGCACGCCTGGGCGCATGTCGCAAACAGGCGAGTCGGGCATCACCAGCCAGTACTCGGCAACCCT TGGGGTCAGCGCGTATGAACTGGACCTGTTCGGGCGGATTCGTAGCCTGAACGATCAGGCGTTGCAGAACTACTTTGCAACCGAAGAAGCCCGCCGCACG
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAISISVTYPGASAQTVQDTVVQVIEQQLNGIDHLRYVSSESNSDGSMTITATFEQGTDP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGVVSEDGSMNKDDLSNYIVSNMQDPISRTEGVGDFQVFGAQYAMRIWLDPAKLNKYNLTP VDVKSAISSQNVQVSSGQLGGLPAVKGQELNATIIGKTRLQTAEEFKKILLKVNTDGSQVRLHDVAEVALGGENYSISAQYNGKPSSGLAIKLATNANAL DTAKALHQTINDLAPFFPPGMKVVYPYDTTPVVSASIKGVVETLVEAVALVFLVMFLFLQNFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFGMVL AIGLLVDDAIVVVENVERVMSEEGLSPKEATKKSMEQIQGALVGIALVLSAVLLPMAFFSGSTGVIYKQFSITIVSAMALSVLVALIFTPALCATMLKPV KKGDHGENKRGFFGWFNRTFDSGVKRYEKGVGNILRHKAPYLLAYVLIVVGMVFLFTRIPTSFLPEEDQGVLFAQVQTPAGTTAERTQVVIDRMREYLLA DESAAVSSVFTVNGFNFAGRGQSSGLAFIMLKPWGERDADNSVFALAARAQAHFSTFRDAMVFAFAPPAVMELGNATGFDVYLQDRAGIGHEKLMQARNQ FLGMASQSKILAGVRPNGLNDEPQYQLEIDDEAARALGVSLTDINNTLSIGLGASYVNDFIDRGRVKKVYLQGEADSRMNPEDLKKWYVRNDEGTMVPFS AFAKGKWTYGAPKLSRYNGVEAMEILGAPAPGYSSGEAMAEVEALAKKLPAGVGISWTGLSYEERLSGSQAPALYAISLLMVFLCLAALYESWSIPIAVM LVVPLGIIGALLATSLRGLSNDVYFQVGLLTTIGLASKNAILIVEFAKELHEQGRTLTEAAIEACRMRLRPIIMTSLAFVLGVIPLAISSGAGSGSQHAI GTGVIGGMITATVLAVFWVPLFFVAVSSFGSKDKEEQKKVDLTKTPNQEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site