Pseudomonas simiae MEB105, RU03_RS25620
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas simiae strain MEB105 contig_42, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCCGACGCCGCCAGCCGTGACTGGATCACGCTGCAGGTCAGCCGTCATCTGCAAACACCCGAATCAGCCGCCGTGGTGATTGATACCGAAGCCGAGCCT TGGGAGAGCGCCTTGCAGGCAGTCGCACCCCGGTTGCGACAGGACGGGCTCAAAGCCGCGATCCATGAACTCAAACAAGGGATGTATGCCGCTCGCAGCG AACGCGCGCGATTTCATTGGCGGCTTGCCCAGGCGCGCCTGTGTGTGCAGGCCGGCAAGCATGAGCTGGCGAAGATCCAGCTCGAACACCTGGACCACGA ACTGCAACACACAGGTCTTGAACACTGGGAGCCGGAGTTGGCCCTTCAGGTCACCCAGCTTCTGTATCGCTGCTGCGACCTGTTGCCACAAAACCACGCA GTGCGTGAGCGCAAGGAAGACACCCATCGCAGGCTGTGCCTCTTCGATCTGGAAGCGGTACTTGAATAGGCTTTCGAGCCACTGAATAAGGAAATACACC
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| DNA Sequence for Gene |
>RU03_RS25620
ATGGCCAAAGACGTTTCGGTCGCCCCCAAGGAGCGTATCAACATCACTTTCAAGCCCGCTGTAGGCGGGGCGCAGGAAGAAGTCGAGCTGCCGTTGAAGC TGTTGGTGCTGGGCGATTTCACCCAGCGTGAAGATGTGCGCAAGCTCGAAGATCGAAAGCCAATTGCGATCGATAAGAACACCCTGGATGACGTGTTGGC CAAACAGGCGTTGAGCCTGACGCTGAACGTGCCTAACCGCCTGCAGGAGGATGCAGACGTTGAGGAACTGGCCATTCAGGTAAGCATTAATTCCATGAAG GATTTTAATCCCGCGAACCTGGTAGAGCAGGTGCCCGAGTTGCACAAGCTGATGGCGTTGCGCGAGGCGTTGATGGCGCTCAAAGGCCCGTTGGGCAACA CGCCGAGCTTTCGCAAGGCTATCGAGCAGGCCCTGGCCGATGACGATTCCCGTGCCCGGGTATTAGCGGAGCTGGGGCTGGACACGCCTGACGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CATTTTTCAGTAAAAGGACACTGACCGCATGACCACACAACAGCACTCACTGCCTGCACAAACCGCTGATCAATACAGCATTCTCGACAACATCGTTGCA CAGACTCTGCTGAGTGCGGACGACGAGGCGTATGGCATTGCCAAGCGTGGCGTCTCGGCGTTCATCGAAGAGCTGATCAAGCCGCAGAACCGTGGCGAGC CCGTCAAGAAGCGGCTGGTGGATCGGATGATTGCCGAGATCGACACGAAGCTCAGTCTTCAGATGGATGAAATTCTGCACCACCCGGATTTCCAGGCCTT GGAAGCTTCCTGGAAAGGTTTGCAGTTGTTGGTTGATCGCACCAATTTTCGCGAGAACATCAAGATCGAACTGCTGAACATCTCTCGGCAAGACCTGCTG GAAGATTTCGAGGACTCTCCGGAACTGACCCAGTCCGGGCTGTACAAGCATATCTACAGTGCGGAATACGGTCAGTTCGGTGGTCAGCCTGTGGGCGCGA
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| Amino Acid Sequence |
>hypothetical protein
MAKDVSVAPKERINITFKPAVGGAQEEVELPLKLLVLGDFTQREDVRKLEDRKPIAIDKNTLDDVLAKQALSLTLNVPNRLQEDADVEELAIQVSINSMK DFNPANLVEQVPELHKLMALREALMALKGPLGNTPSFRKAIEQALADDDSRARVLAELGLDTPDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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