Strain | Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GCGCGATCTGCCGACCAGCGTTGCCGGGGGAAGGTAGCGCGACGACCTGGGCGGCCCTGCCGGAGGCGCCTGCTCAGTTGGGGAACGGTGCTGCCCGCCG AGCGACCGCTGCGCGCCGTGCGCGAGCAGGATGGCCAGTTCGCCATCGGCTGGCGGCTGGCGCCGTCGGTGCGTTTCGATCGGGTCGCAGTGGACGCCTG GCTGAACCGTTTGTCCGGACTGCGGCGGGCCAAGGCGGTGCTGCATTGCGCGGACGGTTGGTATGCAGCGAATGCCGCGCCGTTTGTGGATAACTGGGGC AAGTCCTCGTGGCGGCGGGATAATCGGCTGGAACTGATCCTCGCCGCAGGCGCGGATGAAGAGGCGCTCGAAGAGGCGTTCCTGGCGTGTCGGATGGTCG CGGAATGATCCGCCAAGGTTGCCCTGAGGACGCGACTGAATGATAATAATTATCAGAAGACTCTACTTCCTTACCTTTCACTTCTCCGCAGGTCGCCCTC
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DNA Sequence for Gene |
>PA2G_03871
ATGTCGCCACAGCCTTCACGGTCGCCTGACCGTTTTTCGCTGGCCGCGCTCGCCGAAGACCACCCCACCGCTCCCGCCCAGGGAGACGAAAGCGAGTCCC TGCCATGCGTGAATGCCCAGCGCGGAGAACCCAACCTGCGCGTGGTGGACTGCTCCGGCGCGCGCCGCGACGAGGAAGTGGCGGTCGAGGAAGTGCTGAT CCCCTACGCCCATGGCAGCGATCCCGAAGACGTCCCCGGCGAGCCGCCCAAGTCGCGCTGGTGGTTGTCCTCCGGCGCGGCGGTGGCGATGCATGTGGCG ATCATCGGTGCGCTGGTGTGGGTGATGCCGACCCCGGCCGAACTCAACCTTGGCCACGGCGAACTGCCGAAGACCATGCAGGTGAATTTCGTCCAGCTCG AGAAGAAGGCCGAGCCGACCCCGCAGCCGCCGGCTGCCGCGCCGGAGCCGACGCCGCCGAAGATCGAGGAACCCAAGCCGGAGCCGCCGAAGCCGAAGCC GGTGGAAAAACCCAAGCCCAAGCCGAAACCCAAGCCCAAACCGGTGGAAAACGCCATTCCCAAGGCCAAGCCGAAGCCGGAACCCAAACCCAAGCCGGAA CCCGAGCCGAGCACGGAGGCATCCAGCCAGCCCAGCCCGTCCAGCGCCGCCCCGCCGCCGCCCGCACCTACCGTCGGGCAGAGCACGCCCGGCGCGCAGA CCGCGCCCAGCGGCTCGCAAGGTCCGGCCGGCCTGCCCAGCGGCAGCCTCAACGACAGTGACATCAAGCCGTTGCGCATGGATCCTCCGGTCTATCCCCG GATGGCCCAGGCCCGGGGTATCGAAGGCCGGGTGAAGGTGCTGTTCACCATCACCAGCGATGGCCGCATTGACGACATCCAGGTGCTGGAGTCGGTGCCG TCGCGCATGTTCGACCGCGAAGTGCGCCAGGCCATGGCCAAGTGGCGTTTCGAGCCGCGTGTCAGTGGTGGCAAGATCGTCGCCCGCCAGGCGACCAAGA TGTTCTTCTTCAAGATCGAGAAGCGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGCGGTTCTCTGACAACGAAAAGAGCCGCGCCTTCGAGCGCGGTTTTTTTATTCCCGGTAGGTCTCGCAGACGGGGCTTCGCTGCCTGGGGACGGCAGGC CCCTTGCGCTGTTCCACCGTGGGAACGCGAGGAGATCGGCGTTTGCGCGCCAAGGTTCCAGCCCCGCCGGAATGACGAGCCGCAGGGCGAATAACCGCTT GCGGTTATCCGCCGTGGAACGCAGGGACACCGGATGATTACGCCGCCGGCGTTGCGCGCCCTAGGGCTCCGGTCGGGATGCCGTGCCGTAGACCAACAGT CGGCGGGTGTGGGGGAGTCGGTTACCGCCCCAAAAACCAGGACGGCGACCCGAAGGTCGCCGTCCTGTGGATAAAAAGGCCCGGAGTGTGTCGGGGCCAT GAGCACGAGGCTCAATCAATCGGTCGTGATCTTCGAGTGCTTCTGGGTGTCCTTCATGAACACATAGACCAGCAGCGAGCAGGCGATACAGGCGGTGACG
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Amino Acid Sequence |
>cell envelope biogenesis protein TonB
MSPQPSRSPDRFSLAALAEDHPTAPAQGDESESLPCVNAQRGEPNLRVVDCSGARRDEEVAVEEVLIPYAHGSDPEDVPGEPPKSRWWLSSGAAVAMHVA IIGALVWVMPTPAELNLGHGELPKTMQVNFVQLEKKAEPTPQPPAAAPEPTPPKIEEPKPEPPKPKPVEKPKPKPKPKPKPVENAIPKAKPKPEPKPKPE PEPSTEASSQPSPSSAAPPPPAPTVGQSTPGAQTAPSGSQGPAGLPSGSLNDSDIKPLRMDPPVYPRMAQARGIEGRVKVLFTITSDGRIDDIQVLESVP SRMFDREVRQAMAKWRFEPRVSGGKIVARQATKMFFFKIEKRR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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