Pseudomonas parafulva CRS01-1, NJ69_RS10880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas parafulva strain CRS01-1, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGACCCACTATGCCGTGGCCCTGAAGTACGACCCGGAAAAGGGCGGTTCGGCGCCGCTGCTGCTGGCCAAAGGCACGGATTTCCTGGCCTTGAAGATT CGCGAGATCGGCCAGGAGCACAAGGTGCAGATCCTCGAGTCGCCCGAGCTGGCGCGGGCGATCTACTACTCCACCGAGCTGGAAAACGAGATTCCGGCGG GCCTGTACCTGGCCGTGGCGCAGGTGTTGGCCTACGTCTTCCAGATTCGCCAGTACCGCTCGGGACGCGGCAAGGCCCCGGATCCGCTGAACAAGGACCT GCCGATTCCGCCAGATCTTCGCCGCGACAGTTGAGCGTGTCGCAGAGCGTCCCGCTCGGTCACCGCTAGGGCGCTGCGGCGAACCGCCGCCCCCACCGGG ACCACGCCCTATCGCATCCCAGGCAAAGTTGGAAAGCTTCTTGCAGAGCACCGCCCAGGCGCTGTCCAGGCGTCAAGTTTCTGCTCGAAGAGGATACCCG
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| DNA Sequence for Gene |
>NJ69_RS10880
GTGGATCGCGCTCAGTTACTCAGCAACGCCCGCAATAACCTGGCCGGTCTAGGCCGGGGGAACCTGGGTGTGCCGCTGTTGCTGCTGGTGATGCTGGCAA TGATGATGTTGCCCATCCCGCCGTTCCTGCTCGACGTGTTCTTCACCTTCAACATCGCCCTGTCCATCGTGGTGTTGCTGGTCTGCGTGTACGCCCTGCG CCCGCTGGACTTCGCCGCCTTCCCGACCATCCTGCTGGTGGCCACGCTGCTGCGTCTGGCGCTGAACGTGGCCTCCACGCGCGTGGTGATGCTCCACGGC CAGGAAGGGCATGGCGCGGCGGGCAAGGTGATCCAGGCGTTCGGCGAAGTGGTGATCGGTGGCAACTACGTGGTCGGTGCGGTGGTGTTCGCCATCCTCA TGATCATCAACTTCGTGGTGGTGACCAAAGGTGCCGGGCGTATCTCGGAAGTGAGCGCGCGTTTCACCCTGGACGCCATGCCCGGCAAGCAGATGGCCAT CGACGCCGACCTCAACGCCGGCCTGATCGACCAGGCCCAGGCCAAGGCGCGTCGTGCCGAAGTGGCCCAGGAGGCCGAGTTCTACGGCTCGATGGACGGT GCCAGCAAATTCGTCCGGGGCGACGCCGTCGCTGGCCTGCTGATCCTGTTCATCAACCTCATCGGCGGCATGCTCATCGGCATGCTCCAGCACGGCATGA GCTTCAGCGATGCCGGCAAGGTCTACGCGCTGCTCACCATCGGTGACGGTTTGGTGGCGCAGTTGCCGTCGCTGCTGCTGTCCACCGCCGCCGCGATCAT GGTCACCCGCGCCTCGGGCTCCGAGGACATGGGCAAGCTGATCAACCGGCAGATGTTCGACTCGCCCAAGGCGCTGGCCGTCTCCGGCGGCTTGATGGTG GTCATGGGCCTGGTGCCGGGCATGCCGCACATCGCCTTCCTCAGCCTCGGCCTGCTGGCCGGCGGCGGCGCTTACCTGGTGTGGAAGAAGCAGCAGAAGG CCAAGCAGACGGCCCTGCAGGAGGCCCAGCGCCAGCAGGATCTGCTGCCTTCGCCGCAGCGTGCGATGGAAACCAAGGAGTTGGGCTGGGACGACGTCAC ACCGATCGACATGATCGGTCTGGAGGTCGGCTATCGGCTGATTCCCCTGGTCGACCGCAACCAGGGCGGGCAACTGCTGGCGCGGATCAAGGGCGTGCGC AAGAAGCTGTCCCAGGACCTGGGCTTCCTCATGCCCACCGTGCACATTCGCGACAACCTCGACCTGCAGCCCAGCGCTTACCGTCTCACGCTGATGGGCG TGATCCTGGCCGAGGCCGAGATCTATCCGGACCGCGAGTTGGCCATCAACCCCGGTCAAGTGTTCGGCAGCCTCAACGGTATCGCTGCGCGCGACCCGGC CTTCGGCCTGGAGGCGGTGTGGATCGATGTCGCCCAGCGCGCCCAGGCGCAGTCGCTGGGCTATACGGTGGTCGATGCCAGTACCGTGGTTGCCACGCAC CTGAACCAGATTCTGCAGAAGCACTGCCACGAGCTGATCGGCCACGAAGAGGTCCAGCAGTTGCTGCAAGTGCTGGCCAAAGCCTCGCCCAAACTTGCAG AGGAACTGGTGCCAGGCGTCATTTCCTTGTCGGGGCTGCTCAAGGTCTTGCAGGCGTTGCTCTCCGAGCAGGTGCCGGTGCGTGACATCCGCAGCATTGC CGAAGCCATCGCCAACAATGCGGCCAAGAGTCAAGATACCGCCGCGCTGGTGGCCTCGGTGCGGGTCGGCTTGTCCCGCGCCATCGTGCAAAGCATTGTA GGCACTGAGTCCGAGCTGCCTGTGATCACCTTGGAGCCCAGGTTGGAACAGATCTTGCTCAATAGTCTGCAACGGGCCGGGCAAGGTCAGGAAGACGGTG TTCTCCTGGAGCCGAGCATGGCCGAGAAGCTGCAGCGTTCGCTCATCGAGGCGGCGCAGCGCCAGGAGATGCAGGGCCAGCCGGCCATTCTCCTGGTGGC CGGTCCCATCCGCGCCATGCTGTCGAGATTCGGTCGTCTGGCCGTGCCCAATCTGCACGTGCTGGCCTACCAGGAAATACCGGACAACAAGCAAGTCACC ATCGTTGCCACCGTGGGCCCTAACGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTAGTGGGTTATGCAAGTTAAGCGTTTTTTCGCCGCCGACATGCGTCAGGCCATGAAACTGGTCCGCGATGAGCTTGGTGCCGATGCCGCGATCATCGG CAACCGGCGCATTGCCGGTGGTGTCGAGCTCACGGCCGCGCTGGACTACACACTGTCCGCCCTGGCCCCGCGCGTGCCCAACCTGGAGCTGGAAGACGAG CTGCGCAAGACCCAATCGCGTATCGCTACCGCCCAGGCCGAACTGGACGGGCGTGGCGACGTCGAGGCGGGCAACCGTCAACTGTTCGCCGGCCTTTCGC TGACCGCCTCTGAACCGCTGGTCGAGCCGCATGTCGAGGCGCCCGCTGCCGCGCCGGCTGCGGCCGTGTCGGGCGTCGATCGCCGCGTGTTCGACGCCAT GCGCTCCGAGCTCTCGGGCCTGCGCGAATTGCTCGAAGTGCAGCTCGGCTCGCTCGCCTGGGGCCAACTGCAGGGCAACAAGCCCCAGCAGGCCAATCTC
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| Amino Acid Sequence |
>flagellar biosynthesis protein FlhA
MDRAQLLSNARNNLAGLGRGNLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLVATLLRLALNVASTRVVMLHG QEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVVVTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKARRAEVAQEAEFYGSMDG ASKFVRGDAVAGLLILFINLIGGMLIGMLQHGMSFSDAGKVYALLTIGDGLVAQLPSLLLSTAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGGLMV VMGLVPGMPHIAFLSLGLLAGGGAYLVWKKQQKAKQTALQEAQRQQDLLPSPQRAMETKELGWDDVTPIDMIGLEVGYRLIPLVDRNQGGQLLARIKGVR KKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGVILAEAEIYPDRELAINPGQVFGSLNGIAARDPAFGLEAVWIDVAQRAQAQSLGYTVVDASTVVATH LNQILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALLSEQVPVRDIRSIAEAIANNAAKSQDTAALVASVRVGLSRAIVQSIV GTESELPVITLEPRLEQILLNSLQRAGQGQEDGVLLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVAGPIRAMLSRFGRLAVPNLHVLAYQEIPDNKQVT IVATVGPNG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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