Pseudomonas moraviensis R28-S, PMO01_16900 (ampC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas moraviensis R28-S chromosome, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAGCCTCGGCAACAGCCAACCCACAGCAAAAGTGCCCACCGCGCCGACCGTCAACATGTCGCGATACTGCCCACCGGCCAGACGCTCGAGCATCTGCG CAATATGATCGAATGATGTGCTGAGTACCGGCAGCAAGGTTTCGCCTTCACTGGTCAGCATCAGCCCACGGGGCAGGCGTTTGAACAGGGTCAGGTTGAG TTGCGCTTCCAGGCTTTTGACCTGATGGCTCACCGCCGCTTGTGTCACGCACAACTCGACGGCAGCACGGGTAAAACTCAAATGACGTGCCGAGGCTTCA AATGCGCGCAGAGCGTTGAGCGGCAGTTGCGGTCGAATCATGCGTTGCCCCAAATTTTTCTAATGGCTCATGCGAGTTTTCATCGTTTGTCGATGGCCGG CGAAGTGCCTAAATTGGCCGCGCTGATCGGCCGTCCGATGAAAAATCACCCGCAGTGTAGCGGGATACACCAATCGACACTCATGGAGAGTGATTCAATC
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| DNA Sequence for Gene |
>PMO01_16900
|ampC
ATGTGTTCCTTAAAACCTAGCAAGGTCTTTTCCTACAGCGCTTTCGCACTGTTCGTCGGCAGCGTTGCCTGTCATGCCGCAACGCCGACGGATGCGCAAT TGCAGGCACTGGTCAGCCAAGCCGTCACCCCGGTCATGCAGCAAAACAACATCCCGGGGCTGACCGTAGCGATCACCCTGAATGGCCAAGCGCATTACTT TAACTACGGGGTCGCCGCTAAAGACACCGCACAAAAGGTCAGCGAAAACACCCTCTTCGAAGTCGGCTCGGTGAGTAAAACCTTCACCGCCACCCTCGCC GGTTACGCCCAGGCCACAGGCAAACTCGACCTGTCGAGCATGGCCAGCCAACTCTGGCCGGAGCTCAAGGGCAGCGCCTTCGACAACATCAGCGTGCTGC AACTGGGCACCTACAGTGCAGGCGGACTGCCGCTGCAATTTCCCGCTGAGGCGGATTCTTCCGACAAGATGCTCGGCTATTACCAACAGTGGAAACCGCA ATTTCCCACCGGCAGCCATCGCCTGTATTCCAACCCGAGCCTGGGCCTGTTCGGCTACCTGACGGCGAAAAGCCTCGGCCAGCCATTCGACCAGGCAATG ACGCAAACCCTGCTGCCGAAACTCGGCCTTCAGCACACCTTCCTCAGCGTACCGTCAGCGCAGTCGAAGCTTTATGCCCAAGGCTACGACAGCGCCGACC AACCGGTACGCGTCAGCCCCGGCGCCCTCGACGCCGAAGCCTACGGCATCAAAACCAGCGCCGCCGACCTGCTGCGATACGTCCAGGCACAGCTGCAACC GGCCAGCCTTGCGCCTGATCTGCACCAAGCCATCGCCAACACCCACATCGGCTATTACCGCGTCGGCGACATGACCCAAGGCCTGGGCTGGGAACGCTAC GCCTACCCGATCAGCCTGGAAAAACTGCAAAACGGCAACTCGACCCCCATGGCCATGGAACCGCACAAAGTCGAATGGCTGACTCCACCGCAAGCTGAAC CGGCCAATGTGCTATTCAATAAGACCGGTTCTACACGGGGCTTTGGCGCGTATGTGGCGTTCGTGCCGTCGCGGGACATAGGCATTGTGATTCTTGCCAA CAAGAACTACCCGAATGCCGAACGGGTGAAGATTGCGCATGAGATTTTCAGTCAGTTGACCGAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGATCAAAAGATCGCAGCCTGCGGCAGCTCCATTGACCGAGTGAAAACCCGATCCTGTAGGAGCCGCCGCAGGCTGCGATCTTTTTCGTTTCAGCGCTTA AAGCTGCGCCTGCAAGCGCCAGCCAATGACATCCATCAAGTCACAGCTATCGCGCAACGGAATCGCCAGCACCCGGGCGAAATCCTGCAACAGCAATGCA TCGTGTCCCTTGCCCTCGTCCAGCGAAAGGCTCTCCATCAGCTGCGTCACACAGCGCAAGCGGTAAGCCGCGGTGCCGTGCAACACGTCGATGGGGGCTT CGCTGTCGATCAGCACACAGGGAATTTTGCAGTCAATCCCGGTGATCGGTATGTAACGCGCCATGGTAGAACCTCCCTGTTCAATGTTGAGTCGCCGTTG CGGGTGAATCGAGATTGTCCAGCGCGCGGTTGACCAGCAGTTCTCCGACTACCGCCAATTGCTGGATCGACAACGTCAGGCTGCGCTGCGCACCGCTCAA
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| Amino Acid Sequence |
>class C beta-lactamase
MCSLKPSKVFSYSAFALFVGSVACHAATPTDAQLQALVSQAVTPVMQQNNIPGLTVAITLNGQAHYFNYGVAAKDTAQKVSENTLFEVGSVSKTFTATLA GYAQATGKLDLSSMASQLWPELKGSAFDNISVLQLGTYSAGGLPLQFPAEADSSDKMLGYYQQWKPQFPTGSHRLYSNPSLGLFGYLTAKSLGQPFDQAM TQTLLPKLGLQHTFLSVPSAQSKLYAQGYDSADQPVRVSPGALDAEAYGIKTSAADLLRYVQAQLQPASLAPDLHQAIANTHIGYYRVGDMTQGLGWERY AYPISLEKLQNGNSTPMAMEPHKVEWLTPPQAEPANVLFNKTGSTRGFGAYVAFVPSRDIGIVILANKNYPNAERVKIAHEIFSQLTE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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