Pseudomonas frederiksbergensis SI8, JZ00_RS17870

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas frederiksbergensis strain SI8 contig00009, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGTCAAGAAAGCGTTGACCGGTATGTTGGGCAGCGACGTGCGGGAGAACATCCTGGGCGTGGCCGAAGTTCGCGACGTGTTCCGTTCGCCGAAATTTGG TGCCATCGCCGGTTGCATGGTGATCGAGGGTGTCGTTCACCGTAACCGTCCGATCCGTGTACTGCGTGAAGACATCGTTATTTTCGAAGGCGAGCTGGAA TCCCTGCGTCGCTTCAAGGATGACGCTTCCGAAGTACGTGCCGGCATGGAATGCGGTATTGGCGTCAAGAGCTACAACGACGTCAAGGTCGGTGACAAGA TCGAAGTCTTCGAGAAGGTCCAGGTTGCTCGCAGCCTCTGACTCGCGCACTTCAAGAGCCGCATCGGGCATTTGCATGAACATGCATTGCCTCGCTGGCG GACTCTAAACGCAACGCCCGGTCTGGCTTTTGCCAGGCCGGGCGTTTGCCGCTTTCAGACCTCGCGGGTTTCACCGTGGGGCAGTAACAGGTAACAAGAC
DNA Sequence for Gene
>JZ00_RS17870
ATGGCAAAAGAATACAGCCGTACCCAACGAATCGGCGATCAGATGCAGCGCGAGCTGGCCCAACTGATCCGTCGCGAAGTCAAAGATCCGCGCGTTGGCC TGGTCACCATTACCGCCGTGGAAGTCAGCCGTGACGTCGGTCATGCAAAGATTTTCATCACCGTGATGGGGCAGGACAGCGCCGAAGAAATCGCCCAGAG CATCAAGGTGCTCAACTCGGCTGCCGGTTTCCTGCGTATGCAGTTGGCCCGGGAGATGAAGCTGCGCAGCGTTCCACAGTTGCACTTCCATTACGACGAA AGCGTCGTGCGTGGCGCGCACCTGTCGGCGTTGATCGAGCGCGCCGTGGCTGAAGACAGCCAACACCCGGCGGCGCCTGAACCCGAAGACACCAAGGAGT AA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGTGGCTCAGGTCAAACGTATCCGTCGTAACGTCAGCGGCATCATCCTGCTCGACAAGCCGCTGGGGTTCACCTCCAACGCAGCCTTGCAGAAAGTTC GCTGGCTGCTCAATGCCGAGAAGGCCGGCCACACCGGCAGCCTCGATCCGCTGGCCACTGGCGTCCTGCCGCTGTGCTTTGGCGAGGCGACCAAGTTCTC CCAGTACCTGCTCGATTCCGACAAGGGCTATGAAACCCTGGCGCAGTTGGGCAAGACCACCACCACGGCGGACGCCGAAGGTGAGGTTTTGCTGGAACGC CCGGTGACCGTTGGTCAGGCGGATATCGAAGCGGTGCTGCCGAAATTTCGCGGGCAAATCAGTCAGATACCGCCGATGTACTCCGCTTTGAAGCGCGATG GACAGCCGTTGTACAAACTGGCCCGTGCAGGCGAGGTAGTGGAGCGCGAACCGCGTTCTGTTACTATTGCGCGCTTGGAATTACTGGCTTTTAACGGTAA
Amino Acid Sequence
>ribosome-binding factor A
MAKEYSRTQRIGDQMQRELAQLIRREVKDPRVGLVTITAVEVSRDVGHAKIFITVMGQDSAEEIAQSIKVLNSAAGFLRMQLAREMKLRSVPQLHFHYDE SVVRGAHLSALIERAVAEDSQHPAAPEPEDTKE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site