Pseudomonas fluorescens AU11136, AA055_RS09860

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas fluorescens strain AU11136 Contig_48, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGAGCCGCGTAATCCAACTCTCCATCAAGTCGAAAGATGATGCTGAAGAGAAAGAAGCAATCCAGAGCCTGCGCGACAAGCCAGCTACCTCTGACATTGC TGCTGGTCCGACCACTTTGGGCGACCTGCTGCGTGCACAAATGGAAAAGCAGAACTAAGTTCTGATTGACCATTAAAAAGGGCGACTTCGGTCGCCCTTT TTTGTGCGCGCGAGTTTGATAGTGTTTTCTATCCTCTGTGCTTTGCTTTCCTGGGGTTCTCATGCCTGCGAGGTTGTGTAGCGTTCTCGCTGGTTGAGTC GAATTCAAGCCAATCCAGGTGTCGCTTATTGCAGGGCTGATCGCAGCGTGTCTGTGGTTCTCTTCATTAACCCGAACCTACCTAAAAGTTCCCCTTCAAT ATTTCTTCAGATAAGTCAATCCCTGGGCTGTTCAAAGTCACTTGATCATGCTAAAACCTTTCAAGCGCTGATCTAGCTGCTTGAAAAAGAAGGGAAAAAT
DNA Sequence for Gene
>AA055_RS09860
ATGACGAAGTCGGAGTTGATCGAACGAATTGTCACCCATCAAGGGCTACTCTCATCCAAGGATGTGGAGCTGGCCATCAAGACTATGCTTGAACAAATGT CACAGTCCCTGGCGACCGGAGATCGAATAGAGATCCGCGGTTTTGGTAGTTTTTCGCTGCACTACCGTGCACCTCGTGTGGGGCGTAACCCAAAAACCGG ACAGTCTGTCAGCTTGGACGGCAAGTTCGTCCCTCATTTCAAACCGGGCAAGGAATTGCGGGATCGGGTGAATGAGGACGAGGAAGATGACTTTAATCCT GAAGAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGGAGCTGCTCATGCGTGCTATTAAGCGCACAGCCGTCGTGGTGGTGTGTCTGCTGATTTTCTTTGGCGTGATTATTTTCATTCTTGAAAATCAGCAAGC GACATCACTGACGTTTCTTGGCTGGAATACGCCACAGCTGCCAGCAGCATTGTTCTTTGTCGGTGCGCTGTTGTTAGGGCTAGCGATTGGCCCGCTTATA GGCTTTCTTGCCTACTGGCGAAAATCCGCCGGCTTGAAGCGCCGCATGCACCTTAACTGACCTACGCGTTCAACGTTCATGCGCTTGAGCTTTTACGAGG CGAGTCAGGCGCGTTGAGTGAGGCGGTGTAAGAAATACGGCTTTTTCTGTGTAAGTGATTTCTCAGGAGAATCCCTACTTATGCTCAAGCCTTGTATTGT TTTGTAATACTGGCAGAATGCGGGCTGTTCTCGATTGCCAGCTATTTTTTGTGCTTCACCAGGTGCGCAGTGATGCCATTACCCGGTTGAAAATAAATCG
Amino Acid Sequence
>integration host factor subunit beta
MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQSLATGDRIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNEDEEDDFNP EE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site