Pseudomonas fluorescens PICF7, PFLUOLIPICF7_RS16195
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas fluorescens PICF7, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCACCGCCAAGGGTTGGGCGCAAATGCGCGCAGCCGTGGTGGCGCAGGGGCCGTGGGACCGTCTGGTCAGTTCACCGCTGCAACGGTGCGCGCGGTTTG CCGAGGAACTGGGGGCTCAGCTCCATGTGCCGGTGGCCCTGGAAAAGGATCTGCAAGAGCTGCACTTCGGTGCCTGGGAGGGGCAGAGTGCGGCAGCCTT GATGGAGACCGACGCCGAAGGGCTGGGGTTGTTCTGGGCTGATCCCTACCGCTTTACACCACCGGAGGGCGAACCTGTCAGCGCCTTTTCCGACCGGGTT CTGGGCGCTGTCGCGCGCTTGCATCAGGCCTATGCCGGTGAGCGTGTGTTGTTGATCAGTCATGGCGGTGTGATGCGTCTGTTACTGGCGCAAGCGCGTG GTTTGCCGAGGGAGCAACTGTTGAACGTCGAAGTGGGCCATGGCGGGCTGTTCAGTCTGCACGTCAATGCTGGCGGCACACTGACGGAAGTGGGGTAGAC
|
|
| DNA Sequence for Gene |
>PFLUOLIPICF7_RS16195
ATGCTGCCATTCTGGATCGCCCTGCAATTTCTCAGCAGCCTGCCGATTCGCTTGCCGGGTATGCCGCAGCCTCAGGAATTGGGGCGTTCACTGCTGTTTT ATCCGGTCGTCGGTCTGTTGTTCGGTGTGTTGTTGTGGGGCCTGAACTCGGTATTGATGGGCGCGCCGTTGTTGCTGCATGCCGCATTGTTGCTGACGGC CTGGGTATTGCTCAGTGGTGGCCTGCACCTGGACGGTTTGGCGGACAGCGCCGACGCCTGGCTCGGCGGTTTTGGCGACCGCGAACGCACGCTGACGATC ATGAAGGACCCCCGCAGCGGCCCGATTGCCGTGGTTACCCTGGGGATGGTGCTGCTGCTCAAATTCACTGCGTTGGTGGCCCTGATCGAGCAACCTAACG GCGCAGCACTGATCCTGGCGCCGTTGATTGGCCGCGCATCGATGCTGGCGCTGTTTCTTACCACGCGCTATGTACGTGCCGGCGGATTGGGCCAGGCATT GTCGAATCATTTACCGAGGATCGTCGGCCAGCAGGTACTGATCCTCAGTGGTTTAGCCTGCATCCTCATTGGCGGCTTCAGTGGCGGGCTGGCTGTACTA CTTGCTGCGATCTGCTTCATAGGGCTGCGCCAACTGATGGTCAATCGGCTGGGCGGCACCACGGGCGATACTGCAGGCGCTTTGCTGGAACTGCTGGAAG TCGTGGTTCTGGTCGGCCTGGCGCTGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CACTTTCTTGCATTTCATAAATCGCGGGTATATACACCTTCTATGCTTGCCTCCCAATGTTTGTGCACCAACCTGCGACGTGCCGCCCGTGGCGTCAGCA GGCATTACGACGGCGCCCTTGATGGCTTCGGGATCAACGTCGCCCAGTATTCTTTGCTGTGTAACCTGCAGCGCCTCGATCAGCCGAGTATTTCCAGCCT GGCGGAAGCCATGGGCCTGGATCGCAGCACCTTGGGACGGAACCTGCGGGTGCTGGAAGGTGAGGGCCTGGTAAAACTGGTGGAAGGCGATGACCTGCGC AACCGCCTGGTGATGTTGACCGAGGACGGTGAAGCACGACTTGCCGCCGCATTACCCGCCTGGGAAGCGGCGCAGCAAAAATTGATCGATCAACTCGGCG CGGAAAAACGCGAAACCTTGTTGGCCTTGCTGGACGAACTCGCCTGAGCGCGGGGTTTGTTCGAATACAAGCGGGTATATACCCGCGAGCGGAGAATAAG
|
|
| Amino Acid Sequence |
>cobalamin synthase
MLPFWIALQFLSSLPIRLPGMPQPQELGRSLLFYPVVGLLFGVLLWGLNSVLMGAPLLLHAALLLTAWVLLSGGLHLDGLADSADAWLGGFGDRERTLTI MKDPRSGPIAVVTLGMVLLLKFTALVALIEQPNGAALILAPLIGRASMLALFLTTRYVRAGGLGQALSNHLPRIVGQQVLILSGLACILIGGFSGGLAVL LAAICFIGLRQLMVNRLGGTTGDTAGALLELLEVVVLVGLAL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|