Strain | Pseudomonas fluorescens strain PCL1751, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
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DNA Sequence for Gene |
>PF1751_RS00005
GTGTCAGTGGAACTTTGGCAGCAGTGCGTGGAGCTTTTGCGCGAAGAGCTGCCTGCCCAGCAATTCAACACCTGGATCCGTCCGCTACAGGTCGAAGCCG AAGGCGACGAGTTGCGTGTCTACGCGCCCAATCGGTTTGTTCTTGACTGGGTCAACGAGAAGTACCTGAGCCGCGTTCTCGAATTGCTCGATGAACATGG CAACGGCCTCGCGCCCGTGCTCTCCTTATTAATAGGCAGCAAACGTAGCTCGGCGCCTCGTGCTGCGCCGAATGCGCCTCTGGCGGCGGCTGCGTCGCAA GCCCAGGCGGCAGCGGCACCGGCTGTCAGTGCGCCGTCTCCTGCTCCTGCGCCCTCCAAGTCGTCTGCGCAAAAAAATGCACCAGAGAATGAAGAGCCGT CCCGCGACAGCTTTGATCCGATGGCAGGCGCGGCCTCCCAGCAAGCTCCGGTACGCGCCGAACAGCGCACCGTGCAGGTCGAAGGCGCGCTCAAGCACAC CAGCTACCTGAACCGCACCTTTACCTTTGAGAACTTCGTCGAAGGTAAATCCAACCAGCTGGCCCGTGCTGCCGCCTGGCAGGTAGCCGATAACCCCAAG CATGGTTACAACCCACTCTTCCTTTATGGTGGCGTTGGCTTGGGTAAGACCCACTTGATGCACGCTGTGGGTAACCACCTATTAAAGAAGAATCCGAATG CCAAGGTCGTGTACCTGCATTCGGAGCGCTTCGTGGCTGACATGGTCAAGGCGTTGCAGCTCAACGCAATCAACGAGTTCAAGCGGTTCTACCGCTCGGT TGATGCGTTGCTGATCGACGACATTCAATTTTTTGCCCGCAAAGAGCGCTCCCAGGAAGAGTTCTTCCACACCTTCAACGCCCTGCTCGAAGGTGGCCAG CAGGTCATCTTGACCAGTGACCGTTATCCAAAAGAAATCGAAGGCCTGGAAGAACGCTTGAAATCGCGCTTCGGCTGGGGCTTGACCGTTGCGGTAGAGC CGCCGGAGCTGGAAACCCGCGTCGCGATCCTGATGAAAAAAGCCGACCAGGCCAAGGTCGACCTGCCCCACGATGCGGCGTTCTTCATCGCTCAACGCAT TCGCTCCAACGTGCGTGAGCTGGAAGGTGCACTCAAGCGGGTCATCGCTCACTCTCACTTCATGGGCCGCGATATCACCATCGAGCTGATTCGCGAATCC CTGAAGGACTTGCTGGCACTGCAGGACAAACTGGTGAGTGTGGATAACATCCAGCGCACCGTGGCCGAGTACTACAAGATCAAGATTTCCGACCTGCTGT CCAAGCGCCGCTCGCGCTCGGTGGCACGCCCCCGTCAGGTGGCCATGGCCCTCTCCAAGGAGTTGACCAACCACAGCCTGCCGGAAATCGGTGATGTGTT TGGCGGACGCGACCACACCACGGTCTTGCACGCGTGCCGCAAGATCAATGAACTTAAGGAATCCGACGCGGATATTCGCGAGGACTACAAGAACCTGCTG CGTACACTGACAACGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGACACCAGCGCAGCTTATTAAGGCAAGGGACTAGACCATGCATTTCACCATTCAACGCGAAGCCCTGTTGAAACCCCTGCAACTGGTCGCAGGCGTCGT CGAGCGCCGACAGACCTTGCCGGTGCTTTCCAACGTATTGCTGGTAGTCGAAGGCCAGCAATTGTCCTTGACCGGTACTGACCTGGAAGTCGAGCTGGTG GGTCGTGTGCAGCTGGAAGAGCCCGCCGAACCGGGCGAGATCACCGTACCCGCGCGCAAGCTGATGGACATCTGCAAAAGCCTGCCTAACGACGCGCTGA TCGACATCAAGGTTGATGAGGCGAAGTTGGTGGTCAAGGCGGGTCGCAGCCGCTTCACCCTGTCCACCCTGCCGGCCAATGATTTCCCGACAGTGGAAGA AGGCCCAGGCTCGCTGACCTGCAGCCTGGAGCAGAGCAAGCTGCGTCGTTTGATCGAGCGCACAAGCTTCGCCATGGCTCAGCAAGACGTGCGTTACTAC
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Amino Acid Sequence |
>chromosomal replication initiator protein DnaA
MSVELWQQCVELLREELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLSRVLELLDEHGNGLAPVLSLLIGSKRSSAPRAAPNAPLAAAASQ AQAAAAPAVSAPSPAPAPSKSSAQKNAPENEEPSRDSFDPMAGAASQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPK HGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQ QVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVDLPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRES LKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKNLL RTLTT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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