Strain | Pseudomonas fluorescens strain SF39a contig_8, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GAAGACGGCCAACGCTGCCAGCCGGATCTTGACGATCGCATGGCGTTCTTCGAAGCCACTCGCGACTGGTTGATCCAGCATCAACAGCCGCTGCAGGTTA TTGAAGGCAACTGGGTCGAACGCCAGGCCCAAGCCTTTGCGGCGGTCGAGCGTCTGTTGTCCGCCTGAGCCACCACACCGTTATTTTTTGGCGCATCTGT CCGTTTTTGAAACACTCCTGCCCTCGCAAAGCCGCGTCCAAACGCTGTTCATCAATCCGTGACGCCATCTGTTACGTCAATGAAACACATCGGCGCAAAC CCTTGTGCCAGAGCTTTGCAAAGTCGATGTCCACTCAAGCGGCTCTCGCTGTGTTTCAACAGTGAAACAGTAGCCACACACCTGCCTCGCTCAAAATAAC TAAGCCCTTGATTTAAATAAACAATCCAAACCCGGCACAGCTTTCGCTCTCTCCTTCACAACGCTGAACAACCCAGCCCACTGAAGAAGGAATCGCCGCC
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DNA Sequence for Gene |
>NX10_RS13065
GTGGGGAATTTCAATAAAAGCCTGACCTGCCTCCTGCTGATCGGATCAGCCGCCAGCGCATTGATCAGTGTCAGCGCCCAGGCCGAAGGCAATGGAGTGA TCGTCCTCAACCGCGACGTTCAGCCAATCCCGATCGGGCGTAATGGCGGCAAAGACCCCTACCCGACCACCGTCAATGCCAACCCTTCGGCGCGGATCAA TCAGACCCTCAGCAGCACCGAACTCAGCGACGGCGATTTCGCCAGCGTCGCCAGTGGCTCGTCGATTCGCGGCAACATGACCACGCCCAGCTCCAACCTG CCTGGCATGAATACCCTGACCAATCAGAACGGCCTGCCCGGTATGCGCACTGGTAACGGCGGCGGTTCTGGCGCGTCGATCTCCAACACCGTCAACCGGG CGATGAGCACCGGGCTGGCGCCTCTGACTCGCATGGCCGGAGGCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATGAATCGCACCCTGCTGCTTCTCACCCTGCTCGGCTGCACCAGCGCCATGGCCGATCCGGCTTCAGTCAACCAGGCGAATATCCAGAATTCCGGTGCC CAGTATCGCGGCAACTTCAACGTCAACCAGGCCGCCGGTGACCAGATGCAGCAAGCCAACACCAAAGCGATCGCCATCGGCACCGAGTCCCACGCCACCA CCAGCGTCAGGCAGAACATCGACACGCCCGCCAGCCGCGCCATCGACGCCAGCGCCAACATCGGCGGCAACTCTTTCAGCAATGGCAACGGCATCCTCGG TGTTAACCAGGGTGCCGGTGCCAACAATCAAATGGCCAACGTGACGCGCGTCAGCATCAGTGCCGGCCCGCAGAGCATTGACGACAGCGCCCTTTCACAA CAGAACGTGGCGTTTTTACCGAGCTCAGGAGCAACTGGTACCTCGATCGGCAGTCGCCAGGTCACGACAAGTGATCAGGCCTTCACCGGCAGTCGCGGGG
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Amino Acid Sequence |
>hypothetical protein
MGNFNKSLTCLLLIGSAASALISVSAQAEGNGVIVLNRDVQPIPIGRNGGKDPYPTTVNANPSARINQTLSSTELSDGDFASVASGSSIRGNMTTPSSNL PGMNTLTNQNGLPGMRTGNGGGSGASISNTVNRAMSTGLAPLTRMAGGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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