Pseudomonas aeruginosa DSM 50071, TU83_RS03395
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain DSM 50071 1_1322044_19.3712, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTGAAGCGGCACACGGTGAACTCCGAGTTCGACATCAAGCAGATCTCCGCGCTGGCTCCGGTGGAAATCGCCTACAGCTACGGCAACGTCAGCGACACCG CCTACAAGGCCCTGGCCCAGGCGGGCGCCAAGGCGATCATCCATGCCGGCACCGGCAACGGCTCGGTGCCCGCGCGCGTGGTGCCGACCCTGCAGGAACT GCGCAAGCAGGGCGTGCAGATCATCCGCTCCTCGCACGTCAATGCCGGCGGCTTCGTCCTGCGCAACGCCGAGCAGCCGGACGACAAGAACGACTGGATC GTCGCCCACGACCTGAACCCGCAGAAGGCGCGCATCCTGGCCGCGGTCGCGATGACCAAGACCCAGGACAGCAAGGAGCTGCAACGGATCTTCTGGGAAT ACTGAGTGAACCCTTCCGGCGCCGCCTGCCGGCCGTGCCGGAAAACCGCCCGCTCCGCCGCCCATCGTGGCGGCGGGCTGGCCTAGCCGCGACGACTGTG
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| DNA Sequence for Gene |
>TU83_RS03395
ATGGAATCCCCCGACCCGCCCTGCAGCGTACCTCCGTCACTGACCGTGAAGCCCCGCCTCGTCCGCCAGTTGCTGCTCCCCATTCCCCTGCTCCTGCTGA TGCTCGGCTTCGGCTACGGCGGCTACCGGATCAGCGAGAGCGCCGGCATCCGTGCCCTCGCCGAGAATGGCGAACGCCAGCTGGAGCTGCATGCGCGGAC GGTCGAGAGCGAGATCAGCAAGTACACCTACCTGCCCAGCCTGCTGGAGCTGGAGCGCAGCGTCAGTCACCTGCTCACCGACCCGACGCCATACCGGCGC AACCAGGTCAACGCCTACCTCGAAGGCCTCAACCGCCGCGCCGGCAGCCGCGCGGTGTACCTGCTGGACACCAACGGCCGGGTCCTGGCCACCAGCAACT GGAGCGACCCGGACAGCTACCTCGGCGAGGACCTGTCGTTCCGCGCCTACTGGCAGGACGCGATGAAGGGCAAGCCGGGCCGCTTCTACGGCATCGGCAG CACCCGCGGCGAGCCGGGCTACTACCTGGCCCACGGCCTGGTCCACGGCGGCCGGATCATCGGCGTGGCGGTGGTCAAGGTGAAGATGGACGCCCTCGAG GAACGCTGGGAGAAGGCGCGCCTGGAAGCCTTCGTCAGCGACGAGAACGGCATCATCATCCTCTCCAGCAACCCCGCCCTGCGCCTGAAGGCGGTGCGCT CCCTGAGCGCCGACGACAAGGAGCGCCTGGCGCGCAGCATGCAGTACTACTGGTGGGCGCTGAACGAGTGGCAACCGCTGCAGCGCGAGCCGCTGGCCGC CGGTGTGGAGAAGCTCAGCTTCCCCGCCGATGAGCAGCATCCGCGCGGCGAAGCGGTCACCTACCTGGCGCAGACCCGCGCGCTGAACGACACACCGTGG AACCTGACCCTGCTCAGCCCGCTGGAAGACCTGCGCCGCGACGCGGTACGCAACGGCATGCTGGCCGCCATCGGTTTCGCCCTCCTGGCATTCCTGCTGA TCGCCTGGAACGAGCGGCGCAAGGTACTCGCCACCCGCCTCGCCGCGCGCGAGGCGCTGCAACGGGCCAACGGCGAGCTGGAAGTGAAGATCGCCGAACG TACCGCCGACCTGCAGGCCAGCAACGCACGCCTGACCGCCGAGATCCACGAGCGCCAGCAGGCCGAGGACACCCTGCGCAAGGCCCAGGACGAACTGGTC CAGGCCGGCAAGCTGGCGGTGATCGGGCAGATGTCCACCAGCATCGCCCACGAACTCAACCAACCGCTGGCGGCGCTGCGTACGCTGTCCGGCAACACCG TGCGCTTCCTCCAGCGCGGCAAGCTGGAGACCGCCAGCACCAACCTCGCCACCATCAACGAACTGGTCGACCGCATGGGCCGCATCACCGCCAGCCTGCG TGCCTTCGCCCGGCGCAGCGACGACGCCGGCCAGGCCAGCCTGGCCAAGGCGGTGGACGCGGCGCTGCTGATCCTGCACGGGCGCCTGGAGCAGGACCCG CCGACCCTGCACCGGCATTTCGACGACGTGCGCCTGGGCATCGACCAGACCCGCCTGGAACAGATCCTGGTCAACCTGCTGGCCAACGCCCTCGACGCCA TGAGCGGGCAGGCCGACCGCCAGCTCTGGCTGGAAGGCCGGCGCGAGGAGGAGCGCTACGTCCTGCGCGTGCGCGACAACGGCCCCGGTATCCCGCCGGC GGCGCGCGTCCACCTGTTCGAACCCTTCTTCACCACCAAGCCCGGCGAACATGGCCTGGGCCTCGGCCTGACCCTCTCGGCCAGCCTGGCCACCGCCGCC GGCGGCAGCCTCAGCGTGCAGCACCCCGAAAGCGGCGGAACCGCCTTCGAGCTGAGCCTGTCCCTGGTTCCCGATTCCCCGACTGCGAGTCCCGCCCGAT GA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGAGCCGCTTTCCGTCCTGATCGTCGAAGACGATCCGCATGTCTTGCTCGGCTGCCAGCAGGCGCTGGAGCTGGAGGACATCCCCTGCATCGGCGTCGG CAGCGCCGAGGAGGCGCTGCAACGGGTCGACCGCGACTTCGCCGGCATCGTCGTCAGCGACATCCGCCTGCCCGGCATCGATGGCCTGACCCTGCTGGAG CGTCTCAAGTCCCTCGACCCGAGCCTGCCGGTGGTGCTGATCACCGGTCACGGCGACATCTCCATGGCGGTACAGGCGATGCACGCCGGCGCCTACGACT TCATGGAGAAGCCCTTCTCTCCGGAACGCCTGGTCGAGGTCGCCCGCCGCGCCCTGGAGCAGCGCGGGCTGGCCCGCGAGGTCAGCGCGCTGCGTCGCCA GTTGGCCGGCCGCCAGGACCTGGCGCAACGGATCATCGGCCGCTCGCCGGCGATCCAGGCGTTGCGCGAGCTGATCGCCAACGTCGGCGACACCTCGGCC
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| Amino Acid Sequence |
>two-component sensor
MESPDPPCSVPPSLTVKPRLVRQLLLPIPLLLLMLGFGYGGYRISESAGIRALAENGERQLELHARTVESEISKYTYLPSLLELERSVSHLLTDPTPYRR NQVNAYLEGLNRRAGSRAVYLLDTNGRVLATSNWSDPDSYLGEDLSFRAYWQDAMKGKPGRFYGIGSTRGEPGYYLAHGLVHGGRIIGVAVVKVKMDALE ERWEKARLEAFVSDENGIIILSSNPALRLKAVRSLSADDKERLARSMQYYWWALNEWQPLQREPLAAGVEKLSFPADEQHPRGEAVTYLAQTRALNDTPW NLTLLSPLEDLRRDAVRNGMLAAIGFALLAFLLIAWNERRKVLATRLAAREALQRANGELEVKIAERTADLQASNARLTAEIHERQQAEDTLRKAQDELV QAGKLAVIGQMSTSIAHELNQPLAALRTLSGNTVRFLQRGKLETASTNLATINELVDRMGRITASLRAFARRSDDAGQASLAKAVDAALLILHGRLEQDP PTLHRHFDDVRLGIDQTRLEQILVNLLANALDAMSGQADRQLWLEGRREEERYVLRVRDNGPGIPPAARVHLFEPFFTTKPGEHGLGLGLTLSASLATAA GGSLSVQHPESGGTAFELSLSLVPDSPTASPAR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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