Pseudomonas aeruginosa LESB58, PALES_36621

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0033103 protein secretion by the type VI secretion system
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1665
 ECO:0000249
sequence similarity evidence used in automatic assertion		 18524912
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF49879
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR03354 JCVI: type VI secretion system-associated FHA domain protein TagH IPR017735 Type VI secretion system, FHA domain-containing protein 3 386 1.7E-127
Gene3D G3DSA:2.60.200.20 - - - 7 106 1.7E-14
SUPERFAMILY SSF49879 SMAD/FHA domain IPR008984 SMAD/FHA domain superfamily 19 104 2.9E-16
CDD cd00060 FHA - - 29 101 3.06263E-14
Pfam PF00498 FHA domain IPR000253 Forkhead-associated (FHA) domain 30 96 1.6E-12
Pfam PF20232 C-terminal domain of Type VI secretion system FHA protein IPR046883 Type VI secretion system, FHA domain-containing protein, C-terminal domain 209 384 3.7E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.