Pseudomonas aeruginosa LESB58, PALES_33051

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0042908 xenobiotic transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00702
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00915
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Antibiotic resistance and susceptibility Other LESB58 genes in this class
Membrane proteins Other LESB58 genes in this class
Transport of small molecules Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR00915 JCVI: efflux RND transporter permease subunit IPR004764 Multidrug resistance protein MdtF-like 1 1032 0.0
Pfam PF00873 AcrB/AcrD/AcrF family IPR001036 Acriflavin resistance protein 1 1022 0.0
PANTHER PTHR32063 - IPR001036 Acriflavin resistance protein 2 1029 0.0
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 7 514 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 8 32 1.2E-105
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 36 54 1.2E-105
FunFam G3DSA:3.30.70.1430:FF:000001 Efflux pump membrane transporter - - 38 137 1.1E-26
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 38 817 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 38 130 3.14E-24
Gene3D G3DSA:3.30.70.1320 Multidrug efflux transporter AcrB pore domain like - - 132 330 0.0
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 135 329 1.66E-25
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 179 277 0.0
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 181 270 4.58E-18
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 295 497 8.76E-50
FunFam G3DSA:1.20.1640.10:FF:000001 Efflux pump membrane transporter - - 322 509 3.0E-72
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 335 358 1.2E-105
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 362 383 1.2E-105
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 390 414 1.2E-105
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 444 467 1.2E-105
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 469 492 1.2E-105
Gene3D G3DSA:1.20.1640.10 Multidrug efflux transporter AcrB transmembrane domain - - 515 1019 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 551 568 1.2E-105
SUPERFAMILY SSF82693 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains - - 564 667 6.02E-25
Gene3D G3DSA:3.30.70.1430 Multidrug efflux transporter AcrB pore domain - - 569 668 0.0
PRINTS PR00702 Acriflavin resistance protein family signature IPR001036 Acriflavin resistance protein 618 632 1.2E-105
Gene3D G3DSA:3.30.70.1440 Multidrug efflux transporter AcrB pore domain - - 669 867 0.0
SUPERFAMILY SSF82714 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 719 805 5.62E-20
Gene3D G3DSA:3.30.2090.10 Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains 721 809 0.0
SUPERFAMILY SSF82866 Multidrug efflux transporter AcrB transmembrane domain - - 803 1025 1.31E-44

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.