Pseudomonas aeruginosa isolate RN21, PARN21_RS12790

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTTCGAAGAGCTGAACAAGAACGCCATCGCCAAGCATCCCGGCTCGAGCGTCCACGATACCGAGCTGGAAGAGGAATACGGCCGCTACATCTACCAGGTC GAGTTGCGCGACCCGCAGGGCGTGAAATGGGACCTGGAGCTGGATGCCGCTACCGGCGCCGTGCTCAAGGACCACCAGGACGACTGATGAAGTGGCTCAT GCGCTACGCCGGGATCGTCGCACTGGTCCTGGCGGTCATCAGCCTCGAAGCGATGGCGCGCGACCTGGACCAGGACGAGGTCCTGCGCCTGCGCCAGGAC GGTGTGATACAGCCGCTCGAATCCCTCATGCAGGAAGCCCTGGGGCGTTACCCCGGGGCGCGCCTGCTGGAGGTCGAGCTGGAAGAGGAAGACGACGTGT ATGTCTACGAGGTGGAGCTGCTCACCCGCGACGGCGTCGTGCGTGAACTGGAACTGGATGCCCGCAACGGCCGCATCCTGAAGGACGAGGAAGACGACTG
DNA Sequence for Gene
>PARN21_RS12790
ATGCGGTTGCTGCTGGTTGAGGATCACGTTCCCCTGGCCGACGAACTGATGGCCAGCCTGACCCGCCAGGGCTACGCGGTGGACTGGCTGGCCGACGGCC GCGACGCGGCGGTGCAGGGCGCCAGCGAACCCTACGACCTGATCATCCTCGACCTCGGCCTGCCCGGGCGTCCCGGCCTGGAGATACTCCAGGAGTGGCG TGGGCTGGGACTCGCGACTCCGGTGCTGATCCTCACCGCGCGCGGTTCCTGGGCCGAACGCATCGATGGGCTCAAGGCCGGTGCCGACGACTACCTGACC AAGCCGTTCCATCCGGAAGAGCTGGCCTTGCGCATCCAGGCCCTGTTGCGCCGCGCCCATGGGCTGGCCAACCAGAGCCAGCTGGAGGCCGCCGGGCTGC GCCTGGACGAGCAGCGCCAGTGCGTGTGCCTGAACGGCGCCGACGTCGACCTGACCGCCGCCGAATTCCGCCTGCTGCGCTATTTCATGCTGCACCCCGG CCAGGTCCTGTCCAAGGGGCACCTGGCCGAGCATCTGTACGACGGCGAGACCGAACGCGATTCCAACGTCATCGAGGTCCACGTCAACCACCTGCGGCGC AAGCTCGGCCGCGAGGTGATCGAGACCCGCCGTGGCCAGGGCTACCGCTACGCCGGGGTGGCCGCCGGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GGTCGATCCAGCGGCGTCTGAGCGTCGGCCTGTTCGCGGTGCTGCTGGTGGTCGGGCTGGTCCTCGCGCAGACCGGCCTGTGGCTGTTCGACCAGGGCCT GCGGCGCTATTTCGCCGGCAATCTGCGCGAGGAGGCGGAGAACCTGCTGGTGGCCATGGTGCGCGGGCCGAACGGCATGCAACTGGACGAGCAACGCCTC AACCCGGCGTTCCAGCGCCCGTATTCCGGGCGCTATTTCGTCATCGAGCTGGAAAAGGACACCTGGCGCTCACGCTCCCTGTGGGACAGCGAGCTGGAAG TGCCGCACAAGAAAGGGCTGGTGCAGGGCCTGGTCGATGGGCCCGAGGAGCAGCGACTGCTGGTGTTCCGCGGCCACTACAAGCGCATGGGCCAGAAGCT GCGGATCGTGGTGGCGCAGGACTATACGCCGATCCTGGAAAGCTTCGCCCGTGTGCAGTGGATGGGTCTGGGCGCCGGCGCCCTGGCGCTGCTCCTGGTA
Amino Acid Sequence
>transcriptional regulator
MRLLLVEDHVPLADELMASLTRQGYAVDWLADGRDAAVQGASEPYDLIILDLGLPGRPGLEILQEWRGLGLATPVLILTARGSWAERIDGLKAGADDYLT KPFHPEELALRIQALLRRAHGLANQSQLEAAGLRLDEQRQCVCLNGADVDLTAAEFRLLRYFMLHPGQVLSKGHLAEHLYDGETERDSNVIEVHVNHLRR KLGREVIETRRGQGYRYAGVAAG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site