Pseudomonas aeruginosa LES_CF_sputum_CF03_contigs_26_a1, TC72_RS18170

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain Liverpool Epidemic Strain, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGAACGTTGCCATGAAATCAGCGTCGATGGACAACTCTTATATTCAATAGTTGTACGATCTGAGTTTGTTGTAGTCATTTGCTTAGTTGGCTATCCATAT GATTGACCTAAAGCAATTATAAGTTTAATTGGATTAGCTTTCTAAGTCTTTGGAAAGAGCCGTGAACGACCCTGTAATATCTGGTTGTAGAGCCGTGTAA TGATGTTTCAGGATATTTCATTAATTTTGTAGATTATTGTTTTTCCTTTGTTTTTTTAAAAACAGCTACCAGATTTAGATAGATATTAATTAACTCGGCC ACGTTTTTTCCTGTTCTATCATTGGCCTTCCTTGGGCGCAGGCCTGCCGAAACTGATTATCTTCAGGTCCTCGAAAAGTTCATACATCGACCGCCTTGGG CGAAGCATTCGTACGCCGGAAATCTGTCCGGCCGCACGGATGTTTTCAGCATGTTCTCTGGATGAGTTTCCCGATAAACATCAATTAGAGGAGTTTCCCT
DNA Sequence for Gene
>TC72_RS18170
ATGTGCGGTCTCGCGGGTTGGGTGGATTACACGCGCAAGCTCGACGACGAATTTCCGGCGATCTTCGCCATGACCGATACGCTCGCCTTGCGCGGGCCGG ATGCCGAGGGCATCTGGAAGCACCGCAACGCCCTGCTGGGTCACCGGCGGCTGGCGGTCATCGACCTCAGCGGCGGCGTGCAGCCGATGTCCTATCGCTT TCCCACCGGCCAGGAGGTCACCCTCGTCTACACCGGCGAGGTGTACAACCACGATGCCCTGCGCGAGCGGTTGCGCCGGGCCGGACATGAGTTCCGCACC CGCAGCGATACCGAGGTGGTTCTGCACGCCTATCTGCAATGGGGCGAGCGTTGTTGCGAGTACCTGACCGGGATGTTCGCCTTCGCCGTCTTCGATGGCC GCGACGGCCACCTGCTGCTGGTGCGCGACCGCCTGGGCATCAAGCCGCTGTATTACGCGCGGCACCGCGAGGGACTGCTGTTCGGCTCGGAGATCAAGTC CATCCTGGCGCATCCGGAATTCGCCGCCAGGCTCGACGCGGTCGGCCTGGTCGACCTCCTGACGCTGTCCCGGGGCACTTCGCAGACGCCGTTCCGCGAG GTCCAGGAACTGCTGCCCGGCCACCTGCTGTCCTGGCGTCCCAATTCCCAGGCGAAGTTGCGCCGCTACTGGGAGGTGCGCCGCCAGGAGCATGCCGACG ACCTGCAGAGCACCGTGCAGCGCACCCGCGAACTGGTCACCCGCGCCCTGGGGGCGCAATTGCACGCCGACGTTCCGGTGTGTTCGCTGCTATCGGGTGG GCTCGATTCGACCGCCCTGACCGGCATCGCCCAGCGCATCGCGAAGGCGGAGCACGGCGGCGACATCAATTCGTTCTCGGTGGACTTCGTCGGCCAGGCC GAGCAGTTCCGCAGCGACGACCTGCGTCCCGACCAGGACCAGCCGTTCGCCCTGCTGGCCGCGCAGTACATCGGCAGCCGTCATCGCACCGTGCTCATCG ACAATGCCGAACTGGTCTGCGAACGAGCGCGCGAAGAGGTATTCCGGGCCAAGGACGTACCTTTCACCTTCGGCGACATGGATACCTCGCTGCACCTGAT GTTCGGCGAGATCCGCCGGCATTCCACGGTGGCCATCTCCGGTGAAGGCGCCGACGAGCTGTTCGGTGGCTACGGCTGGTTCCGCGATCCGCAGGCGGTG GCTGCGGCGCGCTTCCCCTGGGCCTCCAGGGTGCGCCTGCCGGCCGGCTTCATCGACGCCGGTTTCAACCGCCGCTGCGATCTCCTCCAGTACCAGCAGG CCAGCTACGACGATGGGCTGCGCCAGGTCGAACACCTGGCCGGCGACAGCCCGGAGGAGCGGCGGATGCGCGAGTTCAGCCATCTGCATCTGAAGCGCTG GATGGTGCTGCTGCTCGAACGCAAGGATCGCCTGAGCATGTGCAACGGCCTGGAGGTGCGGGTGCCCTACACCGACCATGAGCTGGTGGAGTACGTCTAC AACGTGCCCTGGTCGATCAAGAGCCGGGACGGCGAGGAGAAGTGGCTGCTCAAGCGGGCCTGCGCCGACTATGTCCCGGAAGCCGTGCTCAAGCGCCGCA AGAGCCCTTATCCGACTTCTGCCAACCTCGGCTACGAGCGTTTCCTGCGCGGGAGCGTGCGGCGCCTGCTGGAGGACGCGGCGAACCCGGTGTTCGGCAT CGTTTCGCGAGAGTTCCTGGCCGCCGAACTGGAGCATCCGGAGGGGTACTTCAACACCCAGGTGAGCCGCCACAACCTGGAGACCGCACTGGCGCTGGAA GGCTGGCTCAGGTTGTACGGGCTCTCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCGTGACGCGGGGCGTGGCGGGTTCGGGCTGCTGTCCGGCCCGCCGGCGTCTTCAGGCGTCGGGCATTTCGCCGCGTTCGCCGAGCCCCACCGGCATGCC TTCCACGCCGGCATGGAACAGCAGGGCTTCCACCGGTTCAGCCCCGGCTATCAGGCGATGGATGATGTTCATCAGGCAACCCGCCGCCTCGCCTTCCAGC ACCCGCGTGCTCTGGGCTCCGTCGCGGGTCTCCAGGCGCAGTTCGCCCTTGAGCACGTAAAGCGCGCTGGGCATCGGATGGACCTGCCAGTCCAGGCGTT CGTGGGCGGCCAGGCTCAGGCGCTGCACGGTGAGCTGCGGCTGGCCAAGGGGATAGCCGAGGTAGAGCGAGCCGTTCCAGGCGCAGCCGCTGCGCAGCAG GGTTTCGCGGTGCGGACTGGTTGCGGCCGGGAGGTCGCGGCTGGGTGGGAACACATGCACGTGGCTGGGGCGAAGGTCCATCGGGCGTCCTGCGCTTGTC
Amino Acid Sequence
>asparagine synthase
MCGLAGWVDYTRKLDDEFPAIFAMTDTLALRGPDAEGIWKHRNALLGHRRLAVIDLSGGVQPMSYRFPTGQEVTLVYTGEVYNHDALRERLRRAGHEFRT RSDTEVVLHAYLQWGERCCEYLTGMFAFAVFDGRDGHLLLVRDRLGIKPLYYARHREGLLFGSEIKSILAHPEFAARLDAVGLVDLLTLSRGTSQTPFRE VQELLPGHLLSWRPNSQAKLRRYWEVRRQEHADDLQSTVQRTRELVTRALGAQLHADVPVCSLLSGGLDSTALTGIAQRIAKAEHGGDINSFSVDFVGQA EQFRSDDLRPDQDQPFALLAAQYIGSRHRTVLIDNAELVCERAREEVFRAKDVPFTFGDMDTSLHLMFGEIRRHSTVAISGEGADELFGGYGWFRDPQAV AAARFPWASRVRLPAGFIDAGFNRRCDLLQYQQASYDDGLRQVEHLAGDSPEERRMREFSHLHLKRWMVLLLERKDRLSMCNGLEVRVPYTDHELVEYVY NVPWSIKSRDGEEKWLLKRACADYVPEAVLKRRKSPYPTSANLGYERFLRGSVRRLLEDAANPVFGIVSREFLAAELEHPEGYFNTQVSRHNLETALALE GWLRLYGLSA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site